Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi72g00048 ATGCACTATGACTTTCTTAATCTTGAAGTGGCATATTGTTTCTACAAGAATTATGCTAGAGCTAATGGGTTTCCAGTAAGAAAGGGTAGCAAACTTAGAAACTCGAAAGGTGAAATAACACAACAGGCTTTTCTATGTAACAAGGCAGGGTTCAGAGAGGATAGAGGGTTAAGAGATGAAGATCGTCAAAGGGAAGAAAAGCCACATACTCGATGTGGGTGTCGTGCGGAGTTTCGTGTTCATGTTGACAACAATTCTGGTCGTTGGGAGGTACGATTGTTCAGAGATATGCACAATCATGACCTTGTTCCTGAACAGTTGTGTGGTTTGATACCAGGACACAGGAAGATGTCTGAGGCAGATATTTTACAGATGAACAATTTGCAAAATGTTGGCATTACCATCCCGGACATCTATGGAGCATTTGCTAGTCAGGTAGGAGGATACTTGAAAGTCGGGTTTCGTAAGAAAGACATGTACAATGAGGCGGCCCGACAACGCAGGGTAAACCATGATAATAGTTCTACAGTATTTGCAACTGTTATAATATCAAATGAGACTGAAGGCACCTATGTGTGGTTGCTCGAGAAAACTGAAGCTGATTTTGAGTCAGATTATGGCCAGCCACCGATTAAAACCCCATTGTGTTCATTGGAGTTATCAGCCGCTGTTCACTTCACGAGAGAGATGTTCAACATGGTTCGACGTGTGCTTGTGAGAGCTGTTGTGTTCAAGGTAAATAGTCGTAAGCAAACTGTGATGTGTGACATTTATACGATCACAAAGTTTTGCAAGCACAGAGCAAGTGGCAAGTTTGTCATTGCCCAGCAACAGAAGATTTCAGTTGCACTTGTCAACAAATGGAGACTATATAAGACTAGAGAAATTGTGAGCAAACGCATTCAGTATCTAAGAGGCAAGTACGATGCTGAAGTTGGCCAGAGTCACTTTAGGATATACGATGCAACGCGTAATGTTGGGGATCCAAGCCCTGCGCGCAGACCTGATCATGGAAGGAATGTGAACAGAAACATTAATGCTGGGAGAGATCGCAGGCGTCCACATAGGTGTAGTCTGTGTCGGCTTCCCGGCCACAACAGGAATACATGCCCATCGGGTGGTAATCAACAACATCTTCGTCGTGCCGGGGTGGGTGGACCTTCTTCTGCAGGGTCGCCGTTTAAAGGTTACTACAGTCATGAAACTACGTAA 1212 0.4414 MHYDFLNLEVAYCFYKNYARANGFPVRKGSKLRNSKGEITQQAFLCNKAGFREDRGLRDEDRQREEKPHTRCGCRAEFRVHVDNNSGRWEVRLFRDMHNHDLVPEQLCGLIPGHRKMSEADILQMNNLQNVGITIPDIYGAFASQVGGYLKVGFRKKDMYNEAARQRRVNHDNSSTVFATVIISNETEGTYVWLLEKTEADFESDYGQPPIKTPLCSLELSAAVHFTREMFNMVRRVLVRAVVFKVNSRKQTVMCDIYTITKFCKHRASGKFVIAQQQKISVALVNKWRLYKTREIVSKRIQYLRGKYDAEVGQSHFRIYDATRNVGDPSPARRPDHGRNVNRNINAGRDRRRPHRCSLCRLPGHNRNTCPSGGNQQHLRRAGVGGPSSAGSPFKGYYSHETT 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi72g00048 403 MobiDBLite consensus disorder prediction 330 352 - -
Sebi72g00048 403 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 175 - -
Sebi72g00048 403 MobiDBLite consensus disorder prediction 365 403 - -
Sebi72g00048 403 Pfam FAR1 DNA-binding domain 14 104 IPR004330 -
Sebi72g00048 403 MobiDBLite consensus disorder prediction 323 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi72g00048 Sebi-Chr72 1483305 1485444 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi72g00048 FAR1 9.4e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi72g00048 - - tpra:123913749 194.897