Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi72g00024 ATGGCGACCATTGTGGCAGAAGCACTCCTCTCAGCTTCTGTAGAGCTGTTGTTAGACAACATCGTTTCTGGTGAGTTTGTGAACTTCTTTCGGAGAAAGAAGCTTGATGTGTCACTCCTGGACAAGCTGCAAACAACTCTACTGACTCTTCAAGCTGTACTGAATGATGCTGAGGAGAAACAAATCACAAATCCTGCTGTCAAGGAATGGCTGGATAAGCTGAGAGATGTTGTCTTTGAAGCTGATGATCTGTTTGATGAAATCAACACCGAGGTATTGCGATGCAAAATGGAAGCCAAGTATCAAGGCCAAACTGTCAGTGCTAAGGTGTGGAACCTCCTTTCTTCTTGTTTCAAACAGCCTTATAGGATGATCAATTCTAAAATGCAAACATTATTTGAAAAATTGGAACACTTTTCACAAAAAGGACACCTTCTTGGATTGAAAGAAGGTGTTTCTAGCAGTGTTTGGCATGGAACTCCTACAAGTTCTGTGGTAGATGAATCTGCTATTTGTGGTAGAGATAGTGACAAAATGGAACTTAAAATGATTTTGCTGTCAGATGATGCTAGTGATGGCTGCACAAAAATAGGAGTCATTTCCATTGTGGGCATGGGAGGGCTTGGTAAAACAACCCTTGCTAAACTCCTTTACCATGATCCTGATGTAAAAAAGAAATTTAATTTGAAAGCATGGGCACATATCTCAAAGGATTTTGATGTTTTCAGGGTCGTTAAAACCCTTCTTGAATTTGTCACTTCAGAAAAAACTAATACTGATGATAACTTGAATACTCTACAAGTGAAATTGCAGCAAAGTTTAAGCCATAAAAAATTTTTGCTTGTATTGGATGACATATGGGAAGGAAACTACGTTAATTGGAACAATCTAATGGACATCTTTAATGCTGGGGATATGGGAAGTAAGATCATTATCACAACACGACATGAAAGTGTTGCACTAGCCATGCAAACCTTTCTTCCTATCCACTATTTGACACCTTTGGAAAGTGAAGATTGTTGGTCTTTACTTGCCAAACATGCATTTGGACCAAGAAACTCCCAACAACGGTCCGAATTAGAAGTGATTGGCAAAGAAATAGCCAAAAGATGTGATGGTTTACCATTAGCTGCAGTAGCACTTGGGGGTCTTCTTCGCACCAAATTGTCACAAAATGATTGGAATAAGGTACTAAAAAGTAACATTTGGGATTTGCTAAATGTTGAGGTGCAACCAGCTCTGCTCTTGAGCTATCATTATCTTCCGGCTCCTTTAAAACGATGTTTTGCCTATTGTTCAATTTTTCCGAAGAATTCTGAGTTAGATAAAAGGACGGTAGTTCAGTTGTGGATTGCAGAAGGCTTGTTACATCATTTCAGAAGTCAGAAAAGTTGGGAAGAAGTAGGAGAAGAATACTTTGATGAACTAGTGTCAAGGTCGCTCATACTTCGACGGACTGTTGATGGGGAAGAAAGCTTTGTAATGCATGACCTCATCAATGATTTAGCTACAATGGTTTCATCTACATATTGTATCAGGTTGGATGAACAGAAGTCCCATGAAGGTCTTGAAAAAGTACGCCATTTGTCATATAATAGAGGGAGATATGACTCATACAATAAATTTGATAAATTGTTTGGATTAAAAGGTCTACGTACCTTCCTACCCTTACCATTAGAAAGACAGCAGTTGTTTAATTACCTATCAAAGAATGTAGTAAATGAGTTGTTGCCAACAATGAAACAGTTACGGGTGTTGTCTTTGTCAGACTATAAAATCACTGAGTTGCCCAACTCTATTGGAAATTTGATATACCTGCGATACTTAAATCTCTCTTTCACTCCGATTAAAAAGTTGCCTTCTGTGACATGCAAGCTTTACAATCTGCAGACGTTGTTATTGTCAGACTGTTGGAAACTCACTGAGTTGCCCGAGGACATGGGAGAATTGGTGAATCTACGCCACCTTGACATTAGTGGCACTGCATTGAAGGAGATGCCCACACAAATAATCAGATTACAAAATCTGCAAAGCTTGTCTAATTTTATTGTCAGCGAACAACATGATGGAGTGAAGGTTTCAGAGCTGGGAAAATTTCCTCATCTACAGGGGAAGCTTTCCATCTCACAGCTGCAAAATGTTGCCAACACCTCGGACGCTTCTCAAGCAAATTTGAAGATCAAAGAACAAATTGACGAGTTGGAACTAGCATGGGATGGGAATGATTCTGGTTTGCAAATTCAAAGTGTTGTACTTGAACAGTTGCAACCCTCAACAAATTTGAAGAATCTCACCATCAGTGGCTACGGTGGAACCAACTTTCCAAATTGGTTGGGTGATACTTCGTTTGGCAACATAGTGTCTTTGAGCATAATTACTTGTTATCATTGTTCATGGCTGCCACCCCTTGGACAATTACATAGCCTAAAAGAACTCTCTTTTACTGGGATGAAAGCCGTGAAGACTGTCGGTGCTGAATTCTATGGAAGTAATGCTCTTTCATTTCAACCATTTCCCTCCTTAGAGACTCTGAAATTTTGGGGTATGCCAGAGTGGGAGGAATGGAAGTTGATTGGAGGTACATCTACAGTGTTTCCTCGTCTAAGACATCTGTCACTGTCACATTGTCCGAAACTCAAAGGAAACTTGCCCACCAACCTTCCTTCCTTGACTGAACTTGTGTTAGAGAGATGTGATTGTCTAGAGGAGTCAGGGCATTCAGATGATAATGATAATAGCAACACCAACATCATAAGGTCATCAGGTCTATTCCAATTGATGCTGCCTCTGCATGCTCTTCGGGAGTTAAGGATAAAAAGATGTCCCTCTTTGACTTCCTTCCCAAGAGATGGACTACCCAAAACCTTACAATCTCTCGATCTCTACTGTTGTCCGAATCTGGAATTCCTTCCTTGTGAATCCTTGCACAATTACACATCACTTGAGCATTTAAAAATAGTTATTAGCTGTATGTCAATGACATCCTTTACCTTGGGCTCTCTCCCTGTGCTCAGAAGTCTTGATCTCAGCTATTGTACAAATCTTAAATCAATTTTAATTGCCGAAGATGCATCTCAGAGTCTCTCCTTTCTTCAAAGCATTTGTATAGTTTCGTGTGATGAACTGGAGTCATTTTCCCCGGTTGGATTGCCCACTCCTAACCTCATTCATTTAGAGGTGTCTTCTTGTAAGAAGCTTCATTCACTACCAGAACCAATGAACGCTTTCCCTGGCCTTCAGAAAATGAAAATTAGTAGCCTTCCAAATCTGCAATCTTTTGCCAAAGAGGGTTTGCCTTTCAATTTACGGCAACTAACTATCAGCGGGAGGCTGGGAAGCAATCAAGTTACTGAGTGGAGTTTGGAACGTCTCACATGTCTTTCTATGTTGGTGATTCATGGTGATGATATCGTGAAGGCGTTGATGAAAATGGAAGTGCCATTGCTACCGGCTTCAATTGAATACCTAATCATCTATAGTCTTGATGATATAGAATGCTTGGATGGGAAGTGGCTTCACCATCTCACCTCTCTCCAAACCCTTCAGATTTCATTCTGTGACAATCTCAAGTCGTTTCCAGAAGAGGGATTTCCTTCCTCTCTCCAAACTCTGGAGATCCGTGACTGCCCATTACTGGAAGCAAGTTGCCAGAGGAAGCGAGGGAAAGAGTGGGCTAAGATTGCTCGCATTCCCAACATAGTTATCGACTGGAAAATGATCACATGA 3726 0.4053 MATIVAEALLSASVELLLDNIVSGEFVNFFRRKKLDVSLLDKLQTTLLTLQAVLNDAEEKQITNPAVKEWLDKLRDVVFEADDLFDEINTEVLRCKMEAKYQGQTVSAKVWNLLSSCFKQPYRMINSKMQTLFEKLEHFSQKGHLLGLKEGVSSSVWHGTPTSSVVDESAICGRDSDKMELKMILLSDDASDGCTKIGVISIVGMGGLGKTTLAKLLYHDPDVKKKFNLKAWAHISKDFDVFRVVKTLLEFVTSEKTNTDDNLNTLQVKLQQSLSHKKFLLVLDDIWEGNYVNWNNLMDIFNAGDMGSKIIITTRHESVALAMQTFLPIHYLTPLESEDCWSLLAKHAFGPRNSQQRSELEVIGKEIAKRCDGLPLAAVALGGLLRTKLSQNDWNKVLKSNIWDLLNVEVQPALLLSYHYLPAPLKRCFAYCSIFPKNSELDKRTVVQLWIAEGLLHHFRSQKSWEEVGEEYFDELVSRSLILRRTVDGEESFVMHDLINDLATMVSSTYCIRLDEQKSHEGLEKVRHLSYNRGRYDSYNKFDKLFGLKGLRTFLPLPLERQQLFNYLSKNVVNELLPTMKQLRVLSLSDYKITELPNSIGNLIYLRYLNLSFTPIKKLPSVTCKLYNLQTLLLSDCWKLTELPEDMGELVNLRHLDISGTALKEMPTQIIRLQNLQSLSNFIVSEQHDGVKVSELGKFPHLQGKLSISQLQNVANTSDASQANLKIKEQIDELELAWDGNDSGLQIQSVVLEQLQPSTNLKNLTISGYGGTNFPNWLGDTSFGNIVSLSIITCYHCSWLPPLGQLHSLKELSFTGMKAVKTVGAEFYGSNALSFQPFPSLETLKFWGMPEWEEWKLIGGTSTVFPRLRHLSLSHCPKLKGNLPTNLPSLTELVLERCDCLEESGHSDDNDNSNTNIIRSSGLFQLMLPLHALRELRIKRCPSLTSFPRDGLPKTLQSLDLYCCPNLEFLPCESLHNYTSLEHLKIVISCMSMTSFTLGSLPVLRSLDLSYCTNLKSILIAEDASQSLSFLQSICIVSCDELESFSPVGLPTPNLIHLEVSSCKKLHSLPEPMNAFPGLQKMKISSLPNLQSFAKEGLPFNLRQLTISGRLGSNQVTEWSLERLTCLSMLVIHGDDIVKALMKMEVPLLPASIEYLIIYSLDDIECLDGKWLHHLTSLQTLQISFCDNLKSFPEEGFPSSLQTLEIRDCPLLEASCQRKRGKEWAKIARIPNIVIDWKMIT 1241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi72g00024 1241 SMART LRR_typ_2 650 673 IPR003591 -
Sebi72g00024 1241 SMART LRR_typ_2 580 603 IPR003591 -
Sebi72g00024 1241 SMART LRR_typ_2 1175 1199 IPR003591 -
Sebi72g00024 1241 FunFam Probable disease resistance protein At1g61300 159 326 - -
Sebi72g00024 1241 PRINTS Disease resistance protein signature 273 287 - -
Sebi72g00024 1241 PRINTS Disease resistance protein signature 999 1015 - -
Sebi72g00024 1241 PRINTS Disease resistance protein signature 371 385 - -
Sebi72g00024 1241 PRINTS Disease resistance protein signature 199 214 - -
Sebi72g00024 1241 SUPERFAMILY L domain-like 494 903 - -
Sebi72g00024 1241 Gene3D Ribonuclease Inhibitor 951 1097 IPR032675 -
Sebi72g00024 1241 Gene3D Ribonuclease Inhibitor 1098 1223 IPR032675 -
Sebi72g00024 1241 Gene3D - 27 134 - -
Sebi72g00024 1241 SUPERFAMILY L domain-like 929 1227 - -
Sebi72g00024 1241 FunFam Probable disease resistance protein At1g63360 418 505 - -
Sebi72g00024 1241 Coils Coil 40 60 - -
Sebi72g00024 1241 Gene3D Ribonuclease Inhibitor 557 907 IPR032675 -
Sebi72g00024 1241 Gene3D - 158 327 IPR027417 -
Sebi72g00024 1241 Gene3D - 417 505 IPR036388 -
Sebi72g00024 1241 Pfam NB-ARC domain 198 399 IPR002182 GO:0043531
Sebi72g00024 1241 Pfam Rx N-terminal domain 20 100 IPR041118 -
Sebi72g00024 1241 PANTHER DISEASE RESISTANCE PROTEIN RP 40 892 IPR044974 GO:0006952
Sebi72g00024 1241 Gene3D - 334 416 IPR042197 -
Sebi72g00024 1241 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 432 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi72g00024 Sebi-Chr72 634336 638061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi72g00024 575 679 WRKY Transcription Factor Family AT4G12020 37.736 6.07e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi72g00024 - - tpra:123916222 1605.11