Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi72g00023 ATGGCGACTATTGTGGCAGAAGCATTACTCTCGGCTTCCGTGGAGTTGTTGATAGCCAAGATTATTTCCCCTGAGTTCAAGAACTTCTTTCAGAATAGGAAGCTTGATGTTTCACTCCTAGAAAAGCTGGAAACAACACTGCTAAGTCTTCAAGCTGTACTAAATGATGCTGAGGAGAAACAGATCACAAATCCTGCTGTCAAGAAATGGCTGGATAAGCTGAGAGATGCTGTCTTTGAGGCTGACGATTTGTTGGACGAAATCAACACCGAGGCATTAAGATGCAAAGTGAAAGCCGAGTGTCAAGGCCACACTGCCAGTGCTAAGGTGCGAAACATCCTTTCTTCTACTTTCAAACAGTCTTACAGGGGGATCAATTCTAAAATGCAACATTTATTTGAAAGATTAGAACACTATGCACAGAAAGCACACCTTCTTGGATTGAAAGAAGGTGTTTCCAGCAGTGTTTGGCATGGAACTCCTACAAGTTCTGTGGTAGATGAATCTGTTATTTATGGCAGAGATGGTGACAAAAAGAAACTTAAAGATTATTTGCTATCAGAAGATAGAGACTGTAAAATAGGAGTCATTTCCATTGTGGGCATGGGAGGGCTTGGTAAAACAACCCTGGCTAAACTCCTTTACAATGATTCAGATGTAAAGGAGAAATTTAATTTGAAAGCATGGGCACATATCTCAAAGGATTTTGATGTTATCAGGGTCACTAAAACCCTTCTTGAATCTGCCACTTCAGGAAAAACTAATACTGATGATAACTTGAATTCTCTACAAGTGAAATTGCAGCAGAGTTTAAGCCATACAAAATTTTTGCTTGTATTGGATGACATATGGGAAGGAAACTATGTTGATTGGAACAATCTAATGTACATCTTTAATGCTGGGGACATGGGAAGTAAGATCATCATCACAACACGAGATCAAAGTGTTGCATTAGCCATGCAAACCTTTCTTCCTATCCACTATTTGGAACCTCTGGAAAGTGAAGATTGTTGGTCTTTACTTGCCAAACATGCATTTGGAGCAAGCAACTATCAACAACGGTCCAACTTAGAAGTGATTGGCAGAGAAATTGCCAACAAATGTGATGGCTTACCATTAGCTGCAGTAGCACTTGGGGGTCTTCTTCGCACCAAATTTTTGCAAGAGGATTGGAACAAGGTATTAAAAAGTAACATTTGGGATTTGCCAAATGTTGAGGTGCAACCAGCTCTGCTCCTGAGCTATCATTATCTTCCGGCTCCTTTAAAACAATGTTTTTCCTATTGTTCAATTTTTCCGAAGAATTCTGAGTTAGAGAAAAAGATGGTAGTTCAGTTGTGGATTGCAGAAGGCTTGGTACATGAGTCCGGAAATCAGAAAAGTTGGGAAGAATTAGGAGAAGAATACTTTGATGAATTGGTGTCAAGGTCGCTCATACTTCGTTTGACTGTTGACGGGGAAGAAAGCTTTGTAATGCATGATCTCATCAATGACTTAGCTACAATGGTTTCATCTCCTTATTGTATCAGGTTGGATGAACACAAGTCGCATGAAGGTCTTGAAAGAGTACGTCATTTATCATATAATAGAGGGAGATATGACTCATACAATAAATTTGATAAATTGTATGGATTAAAAGGTCTACGTACCTTCCTACCCTTACCATTACAACTAGACGGGTTGTTTCTTTTGTTCTCACCCTGTTACCTATCAAACAAGGTAGTGCATGATGTGTTGCTAGCAATGAAACAGTTACGGGTGTTGTCTTTGTCACACTACCCTAATATCACTGAGTTGCCCAACTCTATTGGAAATTTGAAATACCTACGATACTTAAATCTCTCTTCCACTGCGATTAAAAAGTTGCCTTCAGTAATATGCAAGCTTTACAATCTGCAGACCTTATTGTTGTCCGATTGTTGGAAACTCACTGAATTGCCCGAGGACATGGGAAAATTGGTCAATCTACGCCACCTTGACATTAGTGACACTAAATTGAAGGAGTTTCCGGTACAAATAACAACATTACAAAATTTGCAAAGCTTGTCTGATTTTATTGTCAGCGAACAACATGATGGAGTGAAGGTTGCAGATCTGGGAAAATTTCGTCATCTACATGGGAAGCTTTCCATCTCACAGCTACAAAATGTTGCCAACACCTCCGATGCTTCTCAAGCAAATTTGAAGATGAAAGAACAAATTGACAAGTTGGAACTAACATGGCATGGGAATGACTCTGGTTTGCAAATTCAAAGTCTTGTACTTGAACAGTTGCGACCCTCAACAAATTTGAAGAGTCTCTCTATCAGAGGCTTTCATGGAACTAGCTTTCCAAATTGGTTGGGTGATTCTTCATTTGGCAACATGGTGTCTTTGATTATAGCTAAATGTGATAATTGTTCATGGCTGCCACCCCTTGGACAATTGCATAGCCTGAAAAAGCTCTCTATTTCTGGGATGAAATCTGTGAAGACTGTGGGTGCTGAATTCTATGGAAGTAGTGCTCCTTCATTTCAACCATTTCCCTCTTTGGAGACTCTCTCTTTTAGTGATATGCCGGAGTGGGAGGAATGGAAGTTAATTGGAGGTACAGTTACAGAGTTTCCTAGTCTAAGACTTCTGTCATTGGCAAATTGTCTGAAACTCAAAGGAAACATTCCCACCAATCTTCCTTCCTTAACTGAACTTAGTATAATGGAGTCAGGGCATTCAGATGATAATGATAATAGCAACACCAACATCATAAGGTCATCAGGTCTATTCCACCAATTGATGCTGCCTCTGCATTCTCTTCGGAAGTTAACGATATCTGACTGTCCCTCTCTGACTTCCTTCCCAAGAGATGGTCTACCAAAAACCTTACAATCTCTCTATCTCTATGACTGTGACAATCTGGAATTCCTTCCCTGTGAATCCTTCCACAACTACACATCACTTGAGGAATTAACAATAGTAGATAGCTATGCATCCCAGAGTCTCTCCTTTCTTCAAAGTATCAAAATATATGACTGTGGTGAACTTGAGTCATTTTCTCCGGGTGGATTGCCCACTCCTAACCTCATTTATTTCACGGTGTCTCGTTGTAAAAAGCTTCTTTCACTACCAGAACCAATGAACGCTTTCTCTGGCCTTCATGAAATGGAAATCAGTGACCTTCCAAATCTGCAATCTTTTGCCAAAGAGGGTTTGCCTATCAATTTACAGAAACTAACTATCAGCAAGAGGCTGGGGAGCTATCAAGTCAGTGAGTGGAGTTTGGGACGTCTCACCTGTCTTTCTAAGTTACGACTTGAAGGTGACGATATCGTGAATGTACTGATGAAAATGGAAGTGCCATTGCTACCGGATTCAATTGTGTCCCTAACTATCTCTAGTCTTGATGATATAAAATGCTTGGATGGGAAGTGGCTTCACCATCTCACCTCTCTCCAAACCCTTAAGATTTCAGATTCTCCCAATCTCAAGTCGTTGCCAGAAGAGGGATTGCCTTCCTCTCTCCAAACTCTGAAGATATATGAGTGCCCATTACTGAAAGCAACAAGTTGGCAGAGGAAGCAAGGGAAAGAATGGGCTAAAATTGCTCGCATTCCCACCATAGTTATCGACTTGAAAATGATCACATGA 3624 0.4037 MATIVAEALLSASVELLIAKIISPEFKNFFQNRKLDVSLLEKLETTLLSLQAVLNDAEEKQITNPAVKKWLDKLRDAVFEADDLLDEINTEALRCKVKAECQGHTASAKVRNILSSTFKQSYRGINSKMQHLFERLEHYAQKAHLLGLKEGVSSSVWHGTPTSSVVDESVIYGRDGDKKKLKDYLLSEDRDCKIGVISIVGMGGLGKTTLAKLLYNDSDVKEKFNLKAWAHISKDFDVIRVTKTLLESATSGKTNTDDNLNSLQVKLQQSLSHTKFLLVLDDIWEGNYVDWNNLMYIFNAGDMGSKIIITTRDQSVALAMQTFLPIHYLEPLESEDCWSLLAKHAFGASNYQQRSNLEVIGREIANKCDGLPLAAVALGGLLRTKFLQEDWNKVLKSNIWDLPNVEVQPALLLSYHYLPAPLKQCFSYCSIFPKNSELEKKMVVQLWIAEGLVHESGNQKSWEELGEEYFDELVSRSLILRLTVDGEESFVMHDLINDLATMVSSPYCIRLDEHKSHEGLERVRHLSYNRGRYDSYNKFDKLYGLKGLRTFLPLPLQLDGLFLLFSPCYLSNKVVHDVLLAMKQLRVLSLSHYPNITELPNSIGNLKYLRYLNLSSTAIKKLPSVICKLYNLQTLLLSDCWKLTELPEDMGKLVNLRHLDISDTKLKEFPVQITTLQNLQSLSDFIVSEQHDGVKVADLGKFRHLHGKLSISQLQNVANTSDASQANLKMKEQIDKLELTWHGNDSGLQIQSLVLEQLRPSTNLKSLSIRGFHGTSFPNWLGDSSFGNMVSLIIAKCDNCSWLPPLGQLHSLKKLSISGMKSVKTVGAEFYGSSAPSFQPFPSLETLSFSDMPEWEEWKLIGGTVTEFPSLRLLSLANCLKLKGNIPTNLPSLTELSIMESGHSDDNDNSNTNIIRSSGLFHQLMLPLHSLRKLTISDCPSLTSFPRDGLPKTLQSLYLYDCDNLEFLPCESFHNYTSLEELTIVDSYASQSLSFLQSIKIYDCGELESFSPGGLPTPNLIYFTVSRCKKLLSLPEPMNAFSGLHEMEISDLPNLQSFAKEGLPINLQKLTISKRLGSYQVSEWSLGRLTCLSKLRLEGDDIVNVLMKMEVPLLPDSIVSLTISSLDDIKCLDGKWLHHLTSLQTLKISDSPNLKSLPEEGLPSSLQTLKIYECPLLKATSWQRKQGKEWAKIARIPTIVIDLKMIT 1207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi72g00023 1207 FunFam Probable disease resistance protein At1g63360 415 502 - -
Sebi72g00023 1207 SUPERFAMILY L domain-like 489 985 - -
Sebi72g00023 1207 FunFam Probable disease resistance protein At1g61300 158 323 - -
Sebi72g00023 1207 Gene3D - 30 139 - -
Sebi72g00023 1207 PRINTS Disease resistance protein signature 270 284 - -
Sebi72g00023 1207 PRINTS Disease resistance protein signature 926 942 - -
Sebi72g00023 1207 PRINTS Disease resistance protein signature 196 211 - -
Sebi72g00023 1207 PRINTS Disease resistance protein signature 368 382 - -
Sebi72g00023 1207 Pfam NB-ARC domain 177 396 IPR002182 GO:0043531
Sebi72g00023 1207 Coils Coil 40 60 - -
Sebi72g00023 1207 Coils Coil 71 91 - -
Sebi72g00023 1207 Gene3D - 158 324 IPR027417 -
Sebi72g00023 1207 PANTHER DISEASE RESISTANCE PROTEIN RP 40 860 IPR044974 GO:0006952
Sebi72g00023 1207 Gene3D - 331 413 IPR042197 -
Sebi72g00023 1207 Gene3D Ribonuclease Inhibitor 990 1061 IPR032675 -
Sebi72g00023 1207 Gene3D Ribonuclease Inhibitor 1062 1189 IPR032675 -
Sebi72g00023 1207 Gene3D Ribonuclease Inhibitor 893 989 IPR032675 -
Sebi72g00023 1207 Gene3D Ribonuclease Inhibitor 563 689 IPR032675 -
Sebi72g00023 1207 Pfam Rx N-terminal domain 15 101 IPR041118 -
Sebi72g00023 1207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 429 IPR027417 -
Sebi72g00023 1207 Gene3D Ribonuclease Inhibitor 698 892 IPR032675 -
Sebi72g00023 1207 SUPERFAMILY L domain-like 923 1182 - -
Sebi72g00023 1207 Gene3D - 414 502 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi72g00023 Sebi-Chr72 589700 593421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi72g00023 596 682 WRKY Transcription Factor Family AT4G12020 43.182 2.61e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi72g00023 - - tpra:123916222 1508.81