Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi72g00022 ATGGAAGGCTCCACTCAAGAATCTGAACATAATAGTGGTCCATCATATGAAGACGGTAATAGTGGTTCATTTTCGCAAGAGGCTGAAGACAGTAATCGTGGATACCTGGTGAACCAAGGCGGCTGTGGTGTGTATTTGGTGGATGAAGAATTCGATGGAAACTGGAATGAAGGAGAAAATAATGAAGATGCTGATGAGGTTTCTAAAACTAGTATTGATGGTTTAGAAGATATCGAAGCTATTGATTTGCAGAAATTTAGCCCCCATCAGATAACTAATTTCGATTTCTGTAGTGTGGATGTTGCATACCAATTCTACTTTTGGTATGCTTGGGCTAACGGCTTTGCATCTCGACGGGGGAAGGTAATCTCGAGTAAGAAGACCGGTATGGTGTTGCAACAAAATTTCTTCTGTAATAGGGAAGGCATACGTCTAGAGGATGGTGTCCCATTGGAGGAAAAACAACGTGAGCCGAAAGCTGTAACTAGATGTGGGTGCCGAGCAGAATTTCGGGCACATGTTGACATAAATACAGGGCGCTGGTATTGTTCTTACTTTTATGATAAGCATAATCATGAGTTGCTGGATCCAATATTTTGTTCAATGTTACCGGCACACCGGAAGATGACCTCTAGTGATGTTAATCAGATGAACAATATGCTTAAAGTCGGCATTGGACCTCCTCAAATCTTTGAATCATTTGCTAATCAGTGTGGGGGTTATGAAAAGATAGGTTTCCGGAAGAAAGATATATATAACCAGATAAGTCAACAAAGGCGTATGCAACAGTCAGATGCCGCAGAAGCAGTAAAGTTTTTGCGTGGGTTGGGGCAAAATGACCAGTCCATGTTTTTTAGACATACGACCAGTGAGGACGGTAGGAATGCAACTGCCAACGTAGGAAAACCTGGTTTCACTGCTGACTTTGAGAGTTGTATGTTAGCAAACTATGAGGTTGGCATGTTTCAAAGAAAATGGAATGAATTGGTTGTTAAATATGGTGTTGAAGATAAACCATGGATTAGGGACATGTATGAGAAGAGGGATATGTGGGCCACCGCTTACATGAGGGGGAAATTTTTTGTTGGGTTTAGGACAACCTCTAGGTGTGAAGGTTTGCATTCCGAATTGTCAAAGTTTGTGCACTCAAAACATAATCTCACTGACTTCTTACAACATTTCTTTCAATGTGTTGATCATATGCGGTTTAAGGAGATTGAAGATGACTTTGCATCAATACATGGTGATCCAGTGCTTCAAACTAGTCTCCATGATCTTGAAGAGTCAGCTGCAAAGTTTTTAACTAGGGAGGTGTTTTTCCTATTTCGCCCTGTGCTTGAAAAGGCAGCCATGATGTCTGTGATTGGCTGTAAGGAGTTGTACTCTAGTTATGTGTACACAATTCGCAATCGCCGGGGTTTAGGGAAAGAATGGAGTGTCTCATATAATCCGTCATGTGGTGAATATAAATGCCAATGCATGTGGTTTGAATCACATGGACTACCATGTTCACATATAGTTGTTGTTTTGTGTCATCTGGACATCAAAGAGCTTCCTAATTCTGTTCTACTTCGCAGATGGACGAAGGGTGCAGAAGACATGGTGAATGTGAGTAGTGGTCAATCATCTGCTGGTTGGGATTCACAGAAAGTTTTTAGGGTTGAGGACTTAAATTTCCTGTATAGGAAATTATCAGTTGTAAATGGTGATACAGTTGAAGACTATTATGACACTCGTGAGAAACTACTGGAGGAATATGAAATGAAGAAGGCAAAGAAAGCACAACAAAGGGCTGCAGGTTCTGAACCAGTAGCTTCTGCTAATGAAGGTTTGAGAGATCCATTGCGTGCTAGAGAAAAGGGAACTAGTCAAGCAAGTATGTCAGCCGGTGGCTTAAGAGTTAAGCGGACAACAAAGTGCTCGTGGTGTAGGGTTGCAGGCCATAATCGAGTGACTTGTCCACTTCGAGCACAAAGTCAACAGATGAGCCAGGCAGAACCTCAAAGCTCAAGGTTTGATGATGAAGAAGGCAACTATTATAATTGTGGAACTATATAA 2058 0.4155 MEGSTQESEHNSGPSYEDGNSGSFSQEAEDSNRGYLVNQGGCGVYLVDEEFDGNWNEGENNEDADEVSKTSIDGLEDIEAIDLQKFSPHQITNFDFCSVDVAYQFYFWYAWANGFASRRGKVISSKKTGMVLQQNFFCNREGIRLEDGVPLEEKQREPKAVTRCGCRAEFRAHVDINTGRWYCSYFYDKHNHELLDPIFCSMLPAHRKMTSSDVNQMNNMLKVGIGPPQIFESFANQCGGYEKIGFRKKDIYNQISQQRRMQQSDAAEAVKFLRGLGQNDQSMFFRHTTSEDGRNATANVGKPGFTADFESCMLANYEVGMFQRKWNELVVKYGVEDKPWIRDMYEKRDMWATAYMRGKFFVGFRTTSRCEGLHSELSKFVHSKHNLTDFLQHFFQCVDHMRFKEIEDDFASIHGDPVLQTSLHDLEESAAKFLTREVFFLFRPVLEKAAMMSVIGCKELYSSYVYTIRNRRGLGKEWSVSYNPSCGEYKCQCMWFESHGLPCSHIVVVLCHLDIKELPNSVLLRRWTKGAEDMVNVSSGQSSAGWDSQKVFRVEDLNFLYRKLSVVNGDTVEDYYDTREKLLEEYEMKKAKKAQQRAAGSEPVASANEGLRDPLRAREKGTSQASMSAGGLRVKRTTKCSWCRVAGHNRVTCPLRAQSQQMSQAEPQSSRFDDEEGNYYNCGTI 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi72g00022 685 Pfam FAR1 DNA-binding domain 104 195 IPR004330 -
Sebi72g00022 685 ProSiteProfiles Zinc finger SWIM-type profile. 478 514 IPR007527 GO:0008270
Sebi72g00022 685 MobiDBLite consensus disorder prediction 594 630 - -
Sebi72g00022 685 SMART 26again6 489 516 IPR006564 GO:0008270
Sebi72g00022 685 MobiDBLite consensus disorder prediction 1 30 - -
Sebi72g00022 685 Coils Coil 579 599 - -
Sebi72g00022 685 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 89 588 IPR031052 GO:0006355
Sebi72g00022 685 MobiDBLite consensus disorder prediction 657 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi72g00022 Sebi-Chr72 577047 579586 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi72g00022 FAR1 2e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi72g00022 - - adu:110274973 352.443