Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi729g00017 ATGGAAACTATTAGAATTGTGATTGAACCGACAATGGTAAAGTTTGTTGACCATTTGAATCACTTTTATGTTATCCATAAGACATTGTCTCTTTACCTTAAATATGGGGGTGGTATTAGACTCAAAATTGAGATGAAGGATGAGGAGTTGAATAAAACTATCACCCCTACCTTAGTTAATCTAAATCAGAGGCGTGGTGGTAATAGAGTAATTGTGACTCCTCCTGACAATCCTAACAATGTTAGAATTGGTGTTGTGAACCAATCTGGACGTGTAACTGCTGCTGCCCCGAGGAAAGTGATGAGTTTTGAGAAAGTTATAACAAAGAGTCAATCACGTGCGGGACAGGCCCTACCAATACCAAGGAAGTTTGTGCAAGATTTTATTCGAAAAAAGTGGAAAAAGTTGATCCTACAGGTTGGAGGGAGTCGATTCTATTCCTGTAACTTACTTTTGCGCCCAGGAAGTGATAAAGATTGCCACCTTGGCAAACCTAGGTACAAGTTTGTCTCTGATATGAATTTGAGAACTGGAGATAAGGTGGTTTTTCGGACGATAATTAAAGGACTAAACAAGGTCAATGTGGATATCATTCGCAAGGGGAATTAG 609 0.3924 METIRIVIEPTMVKFVDHLNHFYVIHKTLSLYLKYGGGIRLKIEMKDEELNKTITPTLVNLNQRRGGNRVIVTPPDNPNNVRIGVVNQSGRVTAAAPRKVMSFEKVITKSQSRAGQALPIPRKFVQDFIRKKWKKLILQVGGSRFYSCNLLLRPGSDKDCHLGKPRYKFVSDMNLRTGDKVVFRTIIKGLNKVNVDIIRKGN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi729g00017 202 Pfam B3 DNA binding domain 103 200 IPR003340 GO:0003677
Sebi729g00017 202 Gene3D - 87 201 IPR015300 -
Sebi729g00017 202 SMART B3_2 103 201 IPR003340 GO:0003677
Sebi729g00017 202 SUPERFAMILY DNA-binding pseudobarrel domain 98 191 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi729g00017 Sebi-Chr729 426977 427670 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi729g00017 B3 2.8e-07 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi729g00017 - K01952 lja:Lj0g3v0086279.1 76.6405