Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi728g00018 ATGGGAAGCCTAATTGTGAATGCCCTGACCTGCTACATAGAGGGGTGGGATCAGAATAAAGATCTAGTAGATTTCAAAGAGTATCCAAATGTGAACTGGCCTCTCAATGATTATGATCAGCTGATGGGTGAGTCAGTGGATAAGGATATGTGTAAACAAAAATGCCTTGAAGATTGCTTCTGTTCTGTAGCCATAAATAATGATGCTGGACAGTGTTGGAAGAAAAGATATCCTTTGAGTAATGGAAGGAAACACCCTAACATCAATGGAACAATAGCTCTTGTCAAGGTACCTAAAACAACCTTTTTCTTGTTCTACCACAGGAAGCATTTGAATCCAGCTGCAACAACAAGGTGTTTTACATACAAGGAGCTTGAAGAAGCAACTACAGGCTTCAAACAAATATTGGGTAGAGGTGCTTTTGGGACAGTATATAAAGGGGTAATAACATCAGATACCAGCAGATTTGTTGCTGTCAAGAAGTTAGATAAGGTTTCGCAAGAAGGTGAAAAGGAATTCAAAACAGAAGTGAGTGTGATTGGCCAAACCCACCACAGGAATTTG 564 0.3989 MGSLIVNALTCYIEGWDQNKDLVDFKEYPNVNWPLNDYDQLMGESVDKDMCKQKCLEDCFCSVAINNDAGQCWKKRYPLSNGRKHPNINGTIALVKVPKTTFFLFYHRKHLNPAATTRCFTYKELEEATTGFKQILGRGAFGTVYKGVITSDTSRFVAVKKLDKVSQEGEKEFKTEVSVIGQTHHRNL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi728g00018 188 CDD PAN_AP_plant 17 98 - -
Sebi728g00018 188 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 17 188 - -
Sebi728g00018 188 SUPERFAMILY Protein kinase-like (PK-like) 107 188 IPR011009 -
Sebi728g00018 188 Pfam Protein kinase domain 133 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi728g00018 188 ProSitePatterns Protein kinases ATP-binding region signature. 136 161 IPR017441 GO:0005524
Sebi728g00018 188 Gene3D Phosphorylase Kinase; domain 1 113 188 - -
Sebi728g00018 188 ProSiteProfiles Protein kinase domain profile. 130 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi728g00018 188 Pfam PAN-like domain 25 74 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi728g00018 Sebi-Chr728 425867 426492 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi728g00018 115 188 Receptor kinase-like Gene Family AT4G02010 46.053 2.24e-16 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sebi728g00018 Pkinase 6.9e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi728g00018 - - gmx:100796323 273.478