Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi728g00017 CTTTTGTTGGCTGAGCAAACTAGAGCTGCCAAGACAGGTTTGAGAGGGACAATTGGTTACTTTGCACCTGCATGGTTTAGGAAAGCTTCAATCACAACTAAAGTAGATGTTTACAGTTTTGGAGTGTTGCTGCTAGAGATCATATGCTGCAAATCAAGTGTTGCCTTTTCAATGGAAAATGAAGAAGAGGCACTCCTTGATTGGGCATATCATTGTTATTGCCAAGGAAAAGTAGCTAAGTTGGTGGAAAATGATGAGGCGGCAAAGAATGACATAAAGAGGGTAGAAAAACATGTGATGGTAGCAATTTGGTGCATTCAAGAGGATCCTTCACCAAGACCTTCCATGAAGAAGGTTGTCTTTTAA 366 0.4071 LLLAEQTRAAKTGLRGTIGYFAPAWFRKASITTKVDVYSFGVLLLEIICCKSSVAFSMENEEEALLDWAYHCYCQGKVAKLVENDEAAKNDIKRVEKHVMVAIWCIQEDPSPRPSMKKVVF 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi728g00017 121 Gene3D Transferase(Phosphotransferase) domain 1 2 121 - -
Sebi728g00017 121 ProSiteProfiles Protein kinase domain profile. 1 121 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi728g00017 121 SUPERFAMILY Protein kinase-like (PK-like) 10 120 IPR011009 -
Sebi728g00017 121 Pfam Protein tyrosine and serine/threonine kinase 7 120 IPR001245 GO:0004672|GO:0006468
Sebi728g00017 121 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi728g00017 Sebi-Chr728 425130 425598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi728g00017 4 121 Receptor kinase-like Gene Family AT5G39000 36.441 9.66e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Sebi728g00017 PK_Tyr_Ser-Thr 2.8e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi728g00017 - - gmx:100796323 221.09