Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi728g00007 ATGCATGTGGGGAATGAGCTTGGAGCTGGTAAACCATACAAGGCAAAGCTAGAAGACATGATTGCCTTGGGATGTGCTTTTCTGATGGGCTTCATCAATGTGACATGGATAATGATCCTCAACAAAAAAGAGCAAGAGAGAAACCTCTTGAACTACCTTTTTACCTCAAAGAACTATTCTTGTTCACTGAAGAAGGACTCTATCATGATGCAATGCCTCAGAAGCCCTAAAACCATTGCTTCTGAGAGTGGAACTAACAGAAGTGTCCTCAAGAGGGAGCAGGGGATTCTCTCCATATTTAAGTGTCCTCAAATTGTGGCTTACCAAGGTTGTGACATCACGTTTGAGAATGGTGCTTACTGGTTCAACTTGTTCATGGAGTACGCACCTCGTGGGATGCTCACAGATGCAGTTCGCAAGCACAATGGTGGAATGGAAGAAACCATGGTTGGTTCCCACGCGCCCCAGATTATGCTCGGGCTTAACTACCACCATGAGGAGAAATGA 507 0.4517 MHVGNELGAGKPYKAKLEDMIALGCAFLMGFINVTWIMILNKKEQERNLLNYLFTSKNYSCSLKKDSIMMQCLRSPKTIASESGTNRSVLKREQGILSIFKCPQIVAYQGCDITFENGAYWFNLFMEYAPRGMLTDAVRKHNGGMEETMVGSHAPQIMLGLNYHHEEK 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi728g00007 168 Gene3D Transferase(Phosphotransferase) domain 1 37 168 - -
Sebi728g00007 168 SUPERFAMILY Protein kinase-like (PK-like) 86 165 IPR011009 -
Sebi728g00007 168 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 76 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi728g00007 Sebi-Chr728 220103 220778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi728g00007 72 168 MAP Kinase Kinase Kinase AT1G05100 43.269 1.69e-15 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi728g00007 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi728g00007 K20716 - lja:Lj6g3v1826350.1 122.479