Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi728g00006 ATGGGGGGACGATTTAATTCCTATGATCAATTTAGAGACTGGAGACTTGATGTTGATAACATGTCATATGAGCAATTACTTGAGCTGGGTGAGAGAATTGGTTATGTGAACACTGGACTTAAAGAAGATGAGATGGGACTCAACATAAGGAAAACCAAAATTCTAATTTCAAATGATACACCAAAGCATCAACAGACAAAAGTGCAGCATTTGTCAGGAGGAGTATGA 228 0.3772 MGGRFNSYDQFRDWRLDVDNMSYEQLLELGERIGYVNTGLKEDEMGLNIRKTKILISNDTPKHQQTKVQHLSGGV 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi728g00006 75 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 3 67 IPR045191 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi728g00006 Sebi-Chr728 168664 169097 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi728g00006 3 68 C3H Transcription Factor Family AT2G37150 45.455 1.13e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi728g00006 - - gmx:100818517 122.094