Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi727g00021 ATGGGAAACAGTGAGGATGGGAAATCCGTTAAGACTGAGAAGCCTGCTTCACCTGTAACAACTGATCAGACCAATCAGGCCAACCAGCCTAACATTCATGTGTATCCTGATTGGGCTGCCATGCAGGCATATTATGGGCCAAGAGTCAATGTTCCACCATATTTCAACTCAGCTGTCGCTTCTGGTCACGCTCCTCATCCATACATGTGGGGGCCACCACAGCCTATGATGCCACCATATGGGCCGCCTTATGCAGCATTTTATTCACATGGAGGGGTTTATACTCACCCTGCAGTTGCTATCGGACCAAACTCACATGGTCAAGGAATTCCATCTTCACCTGCTGCTGGGACTCCTTCAAGTGTAGAGACACCAACCAAATTATCTGGAAATACTGACCAGGGTTTAATGAAAAAATTGAAAGGATTTGATGGGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAATGCTGAGCGTGGAGCTGAAAATAGGCTGTCAAAGAGTATGGATACTGAGGGTTCCAGTGATGGAAGTGATGGCAACACTGCAGGGACCAATCAAACAAGGAAACGAAGCCGTGAAGGAACGCCGACCACTGATGGAGAAGGGAAAACTGAGACACAAGACAGTCCAGTTTCCAAAGAGACTGCAGCTTCCCAACAGATGGTGTCAGTTACCCCAGTCAGTGTTGCAGGAAAATTAGTTGGACCTGTAGTTTCTTCAGGTATGACTACAGCACTAGAGCTGAGGAACCCTTCGGCTGTTCATTCTAAGACATGTTCTACTGGTGCGCCACAACCTTGTGCAGTTTTGCCTTCTGAAGCTTGGATGCAGAATGAACGTGAGCTGAAACGTGAGAGAAGGAAACAATCAAACCGCGAATCTGCTAGAAGGTCTAGGCTGAGGAAGCAGGCTGAGACTGAAGAATTGGCACGAAAAGTTGATGGTTTGACTGCTGAGAATATGACACTGAAATCAGAAATAAATCAGTTGACTGAAAATTCTGAGAAGCTGAGGATGGAAAATGCTGCATTAAGGGAAAAACTGAAAAATACTCAAGTGGGACAAACGGAAGAGATAATTTTGAACAGCATTGAGAGCAAGAGGACTACACCTGTAAGTACAGAAAACTTACTATCAAGAGTTAATAATTCCAGTTCTAATGATAGAACTGCAGAGGAAGAGAATGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTGATGCTGTAGCAGCTGGTTGA 1281 0.4496 MGNSEDGKSVKTEKPASPVTTDQTNQANQPNIHVYPDWAAMQAYYGPRVNVPPYFNSAVASGHAPHPYMWGPPQPMMPPYGPPYAAFYSHGGVYTHPAVAIGPNSHGQGIPSSPAAGTPSSVETPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAENAERGAENRLSKSMDTEGSSDGSDGNTAGTNQTRKRSREGTPTTDGEGKTETQDSPVSKETAASQQMVSVTPVSVAGKLVGPVVSSGMTTALELRNPSAVHSKTCSTGAPQPCAVLPSEAWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVDGLTAENMTLKSEINQLTENSEKLRMENAALREKLKNTQVGQTEEIILNSIESKRTTPVSTENLLSRVNNSSSNDRTAEEENDFCENKPNSGAKLHQLLDTNPRADAVAAG 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi727g00021 426 MobiDBLite consensus disorder prediction 168 193 - -
Sebi727g00021 426 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Sebi727g00021 426 CDD bZIP_plant_GBF1 286 334 IPR045314 GO:0003700|GO:0006355
Sebi727g00021 426 MobiDBLite consensus disorder prediction 14 31 - -
Sebi727g00021 426 Pfam Disordered region downstream of MFMR 133 260 - -
Sebi727g00021 426 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 288 303 IPR004827 GO:0003700|GO:0006355
Sebi727g00021 426 Coils Coil 308 349 - -
Sebi727g00021 426 MobiDBLite consensus disorder prediction 254 273 - -
Sebi727g00021 426 MobiDBLite consensus disorder prediction 106 133 - -
Sebi727g00021 426 Pfam bZIP transcription factor 281 343 IPR004827 GO:0003700|GO:0006355
Sebi727g00021 426 MobiDBLite consensus disorder prediction 159 226 - -
Sebi727g00021 426 MobiDBLite consensus disorder prediction 202 226 - -
Sebi727g00021 426 Gene3D - 284 337 - -
Sebi727g00021 426 MobiDBLite consensus disorder prediction 371 426 - -
Sebi727g00021 426 MobiDBLite consensus disorder prediction 1 31 - -
Sebi727g00021 426 MobiDBLite consensus disorder prediction 281 308 - -
Sebi727g00021 426 FunFam G-box binding factor 3 284 339 - -
Sebi727g00021 426 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 283 346 IPR004827 GO:0003700|GO:0006355
Sebi727g00021 426 MobiDBLite consensus disorder prediction 371 388 - -
Sebi727g00021 426 MobiDBLite consensus disorder prediction 104 135 - -
Sebi727g00021 426 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 397 IPR044827 GO:0003700|GO:0006355|GO:0043565
Sebi727g00021 426 SMART brlzneu 281 345 IPR004827 GO:0003700|GO:0006355
Sebi727g00021 426 SUPERFAMILY Leucine zipper domain 284 340 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi727g00021 Sebi-Chr727 416443 420213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi727g00021 1 426 bZIP Transcription Factor Family AT2G46270 51.039 3.56e-117 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Sebi727g00021 MFMR_assoc 8.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi727g00021 K09060 - gmx:547789 667.151