Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi724g00014 ATGCTTGAAATTCTGAGCAGAAAGTGCACAAAGCTTGAGTCACATCTTCAAGAGATCAAGGCAGAACATAAGGGTATGATCAGTTCAAATCAAATTGGGTCAGTACCTAACCTTGAAACAAGCAAAAAAGCCAGACTAGAAATTCCCACAGCAAAAAAGCCATTACAAATCTTTGTCAGAACCCACCCCAATGATGATAGTTTGATAATAAAAGATGGCCATCAATGGAGGAAGTATGGGCAAAAGGTTACCAAAGATAATGCTTCTCCTAGAGCTTACTTCAGGTGCTCCATGGCTCCCAGTTGCCCAGCCAAGAAGAAGGTGCAAAGATGCATACATGATAGGTCTATCCTTGTAGCAACTTATGATGGAGAGCACAACCATGGTGCCCTTCATGAGTCATTCAGACCATCTTCATCATCCACACCTAAAGGCTCATCAATGGCTAATAAGTTACCTCCAACAATCATACCAAGTGACAAAGAAGCCATGAACATTGACTATGCTGGTTCTGGTTGGGCTCAAACTGATACTAGACTTTGTGAGGAGGATGTTATGCAACAGCGTGACCATGGCACCACCAACATCAAAATTGAAGAATATGTGAGTTCTCTAATCAAAGATCCTGACTTCACAGTAACATTAGCTGAAGCAGTTGCTCGCACCATCACTGGTCAACATGAGCAACAAGGTCTAAACCTCAATTTGGCTATTCCAGAAGAGTGA 726 0.4215 MLEILSRKCTKLESHLQEIKAEHKGMISSNQIGSVPNLETSKKARLEIPTAKKPLQIFVRTHPNDDSLIIKDGHQWRKYGQKVTKDNASPRAYFRCSMAPSCPAKKKVQRCIHDRSILVATYDGEHNHGALHESFRPSSSSTPKGSSMANKLPPTIIPSDKEAMNIDYAGSGWAQTDTRLCEEDVMQQRDHGTTNIKIEEYVSSLIKDPDFTVTLAEAVARTITGQHEQQGLNLNLAIPEE 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi724g00014 241 Pfam WRKY DNA -binding domain 71 128 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi724g00014 241 SMART WRKY_cls 70 130 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi724g00014 241 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 37 228 IPR044810 GO:0003700
Sebi724g00014 241 ProSiteProfiles WRKY domain profile. 65 131 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi724g00014 241 Coils Coil 2 22 - -
Sebi724g00014 241 Gene3D WRKY domain 56 130 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi724g00014 241 SUPERFAMILY WRKY DNA-binding domain 66 129 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi724g00014 Sebi-Chr724 354703 355845 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi724g00014 42 231 WRKY Transcription Factor Family AT1G80840 40.500 1.49e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi724g00014 WRKY 1.8e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi724g00014 - - ccaj:109791737 367.081