Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi724g00013 ATGGAAGAAGATGAATATAAAGTGTATATAGCGGGAATAATTGCGCAACTTCGTGATTATTTCCCTGATGCTTCATTTATGGTGTTCAATATGCGGGAGGGAGAAAACCAAAGCCAGATATCAAACATTTTGTGTGACTATGATATGACTGTGATGGACTATCCTCGACAGTATGAAGGTTGCCCGTTACTTACCATGGAGATGATCCACCATTTCTTGAGATCAGGTGAAAACTGGCTTCAACTTGGGCAACAAAATGTTGTCTTGATGCATTGTGAACGAGGTGGGTGGCCAGTTTTGGCATTTATGCTGGCCGCACTCTTGATTTATAGGAAGATGTTTACAGGGGAGCAGAAAACTCTAGACATGATATACAAGCAAGCTCCTCGGGAATTTTTGCAGTTGATGTCACCATTGAATCCAATACCTTCACAATTGAGGTATCTTCAGTATATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTAGATAGGGCACTTACATTGGACTGTGTAATCATGAGACTCATTCCTAACATGGATGGAGAAGGTGGTTGCCGTCCTATATTTAGGATATATGGACAGGACCCTTTTATTCCTGCTGATCGGACTCCCAAAGTTCTCTTTTCAACTCCAAAAAGGAGCAAACTTGTTCGGCAGTACAAGCAGGCTGATTGTGAACTAGTTAAGATTGACATCCATTGTCATGTTCAAGGTGATGTTGTTCTTGAGTGTATTAGTTTGGACAGTGATTTGGAACGTGAACAAATGATGTTCCGGGTGATGTTCAATACAGCATTTATAAGATCAAATATTTTGATGCTTAACCGTGACGAAATTGACATGTTATGGAATGCCAAAGATCACTTCCCTAAAAGTTTTAGAGTAGAGGTTCTTTTCTCGGATATGGATGCTTCATCTTCTGTTATTTCAATTGATCTGCCTCGTATTGAGGAGAAAGAAGGCCTACCTGTTGAGGCTTTTGCAAAGGTTAAGGAAATTTTCAGCCATGTTGATTGGCTAGATTCAAAACCAGAGGTAGCAAATGTGCTCCAACAGATCACAGCATCAAATATCCTTCTGGAAAGGTTGGACAGCGGGGTTTCTGCATCACCGAGTAGCTTACTTAAGGAGTCATTGTCTGGAAGATTTAAATTTGATTCAAAGTCACAAAATGATACAAATAGTCCGACTTCTGCAGTTCGGGGGAGATTTTCTTTGTCCTCATTGGAAGATTCTGGGGATGCTCCTATAGAGAAGAAGATAGAACCATTAGAATCAAAGACACTGTCAGAAAACAACAACAACAACACACTTGCATCTTTAGGTCAGGAGAACCATCCTATTCCTTTGTTTGGGCTCTCAACAGATTCAGATTCTTCTAAAAAGGAGACCAGATCATTAGAATCAAAACAATCATTGAAAAATGATACCGAATTTCCTACTTCTATGGATCAGGAGAAACAATCTATCCCCTTAATTGAACCATCTATGGATGCAGATTCAATTGAAAAGAAGATTGGGTCATTGGAATATGAGGAAAATGATATTGAATCATTAGCATCAAAGGTAATGTTGGAAAATGAAACCGAGTTTCCTACATCCATATCTCAAAGGGAACAATCTATTCACTTAATTGAACCATCCACTGATGCAAATTCAATGAAAAAGAAGATTGGACTGTTAGGATCAAAGGAAAAGGAGATTGAATCGTTAGACTCAGAGGCATTGTCTGAAAATAATAGAAGATTTAAATTTGAACCAAAGATACTGCCAGAAATTGCTGTAAGAATCCCGACTCCTGTAGTTCAAGAGAAACCTTCTATGTCCTCATTTGAACCATCTGGGGATGCTCCTATGGAAAAGAAGAAAGAACCTTTAGAATCGAAGGCATCAGCAGAAGATTCACATTCTGCTACAATGCAGATTGAATCATTAGAATCAAAGGCATTGGTGGAAAATGATACTGAGGTTTCTACATCTATGGCTCAGGGGAAAAAGTCTATTCCCTTAACTGAACCATCCATGTATGCAAATTCAATGAAACATAAGATGGGACAATTAGAGTCAAAGGGAAAGGATATTGAATCATTAGAATCAAAGTCATTGATAGGAAATGATGCCAAATATCTTCCATCTATGCCTCAGGGGAAACAATCAATTCCGTTAATTCAACCATCCACGGATGCAAATTCAATAAAAAAGAAGATTGGGCAATCAGAATCAACGGTGTTGTCAGAAAATGATATCAAGAGTCTCACATCCACAGTTCAAAGGAAACAAAATAGTCCCTTAATTGAACCGTTCATTGATGCAAACTCAATTAAAAAGAAGATCGAACCTCAAGAAATGCAGGTTGCTCTTCAGCTACCCACCCAATCTAAAATAATTTCTCCACGGGATCATACACCAATGGATATCAAAGAAGAAGTCACTCCTGCAGTGACAATATCTTCTGCTTCTTGGCCTTCTTCAAAATCAAAGGTGCCAAAATCCATAGAGCCTAGTTCTACAAGTGTTCCTCCAACATCATCATCAACATTGCTTTCATCTATGCCATTAAAATCTTCAGTGGATGCTGTTGTTGCCATGGAGAAAACTTTTGGACCCCTTGCTCCTGCTCCTCCACCTCCACCTCCAACTTCTCAATTTTCCTGTCCTTTTTCTTCTCCATTGAGTATGAACAAGTCTGCTGTTATGGCTGGTCCTCCTCCCCCACCTCCACCTCCTGGACATTCTGGCACTGCACCTGCCTCTACTTCTACACCATCAGTGCCACCTCCACCCCCTCCTCCTGCTTCTGCATCCCAAAATTCTCTGTCTAATAACTCTGCAAATGTTCCACCTGTACCCCCACCTCCTGCCCCTTCTGCCAATGGATTATCAAACTCTGGCGCTGCTTCCCAGCATGCACCTCCAGTTCCTGGACCACCTTCAGCTCCATTTGGTGCAAAAGGACGTGGCCTATTGCGAGCTAATCCAAAAGGTCAGTCTCAGACTAAAAGGAGCAATCTTAAACCTTACCATTGGTTAAAATTAACAAGGGCCATGCAAGGAAGCCTATGGGCTGAGACACAGAAACTTGATGAAGCTTCTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGACTCTTTTCTCTGCAGCTGCTCCAAATTCTGATCGTGAAAAAGGAGGAAAAACAAATCGTCGTGCCTCAGGGAATAAACCTGACAAAGTTCAATTGATTGAGCTCAGACGGGCGTATAACTGTGAGATCATGCTTACAAAAGTCAAAATCCCTTTGCCTGATTTAATGAGTGCCGTGCTTGCATTGGACGATTCAGTATTAGATTCTGATCAAATTGAGAACCTCATAAAGTTCAGTCCAACCAAAGAAGAGATGGAACTGCTCAAGGGATATAATGGAGATAAGGACAACTTGGGAAAGTGTGAACAGTTCTTCATAGAATTAATGAAGGTTCCAAGAGTAGAAAGCAAGCTAAGAGTTTTCTCTTTTAAGATACAATTCTCCTCCCAGGTTTCAGAGCTTAGAAGGGACTTGAATATTGTAAATTCTGCATCTGAAGAGATCAGGAATTCAGTCAGGTTGAAAAGAATCATGCAGACCATTCTTTCTCTGGGTAATGCTTTGAACCATGGAACTGCAAGAG 3655 0.4055 MEEDEYKVYIAGIIAQLRDYFPDASFMVFNMREGENQSQISNILCDYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNVVLMHCERGGWPVLAFMLAALLIYRKMFTGEQKTLDMIYKQAPREFLQLMSPLNPIPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIMRLIPNMDGEGGCRPIFRIYGQDPFIPADRTPKVLFSTPKRSKLVRQYKQADCELVKIDIHCHVQGDVVLECISLDSDLEREQMMFRVMFNTAFIRSNILMLNRDEIDMLWNAKDHFPKSFRVEVLFSDMDASSSVISIDLPRIEEKEGLPVEAFAKVKEIFSHVDWLDSKPEVANVLQQITASNILLERLDSGVSASPSSLLKESLSGRFKFDSKSQNDTNSPTSAVRGRFSLSSLEDSGDAPIEKKIEPLESKTLSENNNNNTLASLGQENHPIPLFGLSTDSDSSKKETRSLESKQSLKNDTEFPTSMDQEKQSIPLIEPSMDADSIEKKIGSLEYEENDIESLASKVMLENETEFPTSISQREQSIHLIEPSTDANSMKKKIGLLGSKEKEIESLDSEALSENNRRFKFEPKILPEIAVRIPTPVVQEKPSMSSFEPSGDAPMEKKKEPLESKASAEDSHSATMQIESLESKALVENDTEVSTSMAQGKKSIPLTEPSMYANSMKHKMGQLESKGKDIESLESKSLIGNDAKYLPSMPQGKQSIPLIQPSTDANSIKKKIGQSESTVLSENDIKSLTSTVQRKQNSPLIEPFIDANSIKKKIEPQEMQVALQLPTQSKIISPRDHTPMDIKEEVTPAVTISSASWPSSKSKVPKSIEPSSTSVPPTSSSTLLSSMPLKSSVDAVVAMEKTFGPLAPAPPPPPPTSQFSCPFSSPLSMNKSAVMAGPPPPPPPPGHSGTAPASTSTPSVPPPPPPPASASQNSLSNNSANVPPVPPPPAPSANGLSNSGAASQHAPPVPGPPSAPFGAKGRGLLRANPKGQSQTKRSNLKPYHWLKLTRAMQGSLWAETQKLDEASRAPEFDMSELETLFSAAAPNSDREKGGKTNRRASGNKPDKVQLIELRRAYNCEIMLTKVKIPLPDLMSAVLALDDSVLDSDQIENLIKFSPTKEEMELLKGYNGDKDNLGKCEQFFIELMKVPRVESKLRVFSFKIQFSSQVSELRRDLNIVNSASEEIRNSVRLKRIMQTILSLGNALNHGTAR 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 618 633 - -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 922 936 - -
Sebi724g00013 1218 ProSiteProfiles Formin homology-2 (FH2) domain profile. 996 1218 IPR015425 -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 817 853 - -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 634 669 - -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 708 728 - -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 901 915 - -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 871 886 - -
Sebi724g00013 1218 Pfam Formin Homology 2 Domain 998 1217 IPR015425 -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 600 674 - -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 387 407 - -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 429 445 - -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 870 1008 - -
Sebi724g00013 1218 Pfam C2 domain of PTEN tumour-suppressor protein 166 302 IPR014020 -
Sebi724g00013 1218 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 15 153 IPR029021 -
Sebi724g00013 1218 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1009 1215 - -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 1047 1071 - -
Sebi724g00013 1218 Gene3D - 162 307 - -
Sebi724g00013 1218 SMART PTEN_C2_2 163 303 IPR014020 -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 460 474 - -
Sebi724g00013 1218 MobiDBLite consensus disorder prediction 387 488 - -
Sebi724g00013 1218 Gene3D Formin, FH2 domain 991 1218 IPR042201 -
Sebi724g00013 1218 ProSiteProfiles C2 tensin-type domain profile. 165 304 IPR014020 -
Sebi724g00013 1218 Gene3D Protein tyrosine phosphatase superfamily 1 157 IPR029021 -
Sebi724g00013 1218 PANTHER FORMIN-J 1 560 - -
Sebi724g00013 1218 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 167 304 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi724g00013 Sebi-Chr724 342263 349816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi724g00013 1 401 FH2 protein (formin) Gene Family AT2G25050 67.488 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi724g00013 - - aprc:113848213 1223.76