Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi723g00019 ATGAGACGGATGAAGAAGGAGATTGAAGTTGAGGTTCTCCCCAATGATCAGAGTGAGTCACAGTTAAATGATGAGGGTTGTGAAGGAAGTGCCTATGGAGTTGTTCTGAAAAAAGGGCCATGGACACCTGCTGAAGATGATATTTTGGTGGATTATGTCAAGAAGCATGGGGAGGGGAACTGGAATGCTGTTCACAAGCACACGGGCCTGTTACGTTGTGGAAAAAGTTGTCGACTGCGGTGGACTAATCACCTAAGGCCAAATTTAAAGAAAGGGGCGTTTACCACAGAGGAGGAGCGCTTGATTGCTGAGCTTCATGCAAAAATGGGAAACAAATGGGCACGCATGGCGGCACATTTATCAAGGAACTTCCATCCAATAACCCGGTCTTTTGGTTTGACATCTCCCAGAAAATATGGAAATCTAGGCATAGTTTTTGAGTTCTCACCAAAGATAGCGGCCTCACGCCACTGCCTTTTCAATGTCTCAGAGCGTTTTGAATTAGCGGGAGTTGCGGCTGCTATCCCGGAAAATGGTGGCCCTTTTGGCGCTATTCTTCTCAGAGAAAAAATCCCCTATTTATCCACCCAGTTATGTGTGTTATTGAGTCCATTTTTTGGGTTGCCTGGTCGGACAGATAATGAGATAAAGAACTACTGGAACACCCGGATCAAGAGGCGTCAACGGGCTGGATTGCCACTTTATCCTCCTGAAGTGTGTTTGCAAGCATTACAAGAGAGTCAGCATGGCCAAAACACTTGTGGAATTAATGGTGGCAATAAAGTGCATCCTGATTTCTTGCAGAAAAAGAGTTATGAGATACATGATGCAATATTTGACAGTCTGAAGGATAACCAGGGAAGCTTACCTTATGTGCCTGAGCTTCATGATATTTCTGATTATGGCAATATGCTGAAAGGTCTTGATTCTTCTCAATTTTGTTTTGTGCCATCAACACCATCTAACCATAAACGTCTTCGAGAGTCAACAACGCCATTTCTTGATTCCGGTGGTATGAACAGAAATGGTTTTTATCCATTTGATTATATTCAGGATAATACTTCTGATAACATTGCACAATCATTTGGAATGCAATCACCCCTTGATCCTGGCCCCTCCTCACACAGCTCAATTTGTTACAGCCATTCCCTTTCAAATGGCAATTCCTCTACTTCTAAGCCAACTCCGGAGGCTGTGAAGTCGGAGCTCCCTTCACTCCAATATCCAGAAATTGATTTAGGTAGCTGGGGCACATCTCCCCCACCTCCTTTACTTGAGTCAGTTGATGATTTCATTCAGTCTCCTACGCCAATTAGTACACTGGACTCAGATTGTTCTTCTCCACAAAATAGTGGCCTGCTGGATGCTTTACTTTATCAGGCAAAGACTCTGAGCAGTTCAAAGAACCATTATTATGACAAGAGTTCAAATTCATCTACCGCAACTCCTGGCGACAGAGTGGACAGCTCTGCGCTGAACATGTATGACACAGAATTGGAAGACTATGCTGACCCTGTATCTCCATTTGGTGCATCTTCAATATTGAATGAGTGCCCTGCTGTTAGTGCCAATGTAATGAATTCATTGGATGAACAGCTACCTGTTCAAACCTTTAATGGCAACATTGTGAAATTAGAGTATGTTGACCAGGTTTGGACCCCTGATAGTGAAAATCAAACCATGTCTCTGTTGAATGTTACTCGGCCAGACTTCTTGCTTGCTTCAGATTGGTATGAGCTAGGTTCTGGGCATGGCAAGAACCAAGCCATCATGACTGATGCTACATCAACCCTTCTTGGAGATGATATAGCCACTGACTATAAACATATGACTGCTGGAACTTCTAAATCAAGTCAGGTATTGGAGTTTGGTTCTTGTGCATGGAACAACATGCCTGCTCTTTGTCAAGTGTCTGATCTCGGTTAA 1926 0.4356 MRRMKKEIEVEVLPNDQSESQLNDEGCEGSAYGVVLKKGPWTPAEDDILVDYVKKHGEGNWNAVHKHTGLLRCGKSCRLRWTNHLRPNLKKGAFTTEEERLIAELHAKMGNKWARMAAHLSRNFHPITRSFGLTSPRKYGNLGIVFEFSPKIAASRHCLFNVSERFELAGVAAAIPENGGPFGAILLREKIPYLSTQLCVLLSPFFGLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCLQALQESQHGQNTCGINGGNKVHPDFLQKKSYEIHDAIFDSLKDNQGSLPYVPELHDISDYGNMLKGLDSSQFCFVPSTPSNHKRLRESTTPFLDSGGMNRNGFYPFDYIQDNTSDNIAQSFGMQSPLDPGPSSHSSICYSHSLSNGNSSTSKPTPEAVKSELPSLQYPEIDLGSWGTSPPPPLLESVDDFIQSPTPISTLDSDCSSPQNSGLLDALLYQAKTLSSSKNHYYDKSSNSSTATPGDRVDSSALNMYDTELEDYADPVSPFGASSILNECPAVSANVMNSLDEQLPVQTFNGNIVKLEYVDQVWTPDSENQTMSLLNVTRPDFLLASDWYELGSGHGKNQAIMTDATSTLLGDDIATDYKHMTAGTSKSSQVLEFGSCAWNNMPALCQVSDLG 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi723g00019 641 Gene3D - 93 227 - -
Sebi723g00019 641 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 5 598 - -
Sebi723g00019 641 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 33 89 IPR017930 -
Sebi723g00019 641 MobiDBLite consensus disorder prediction 469 489 - -
Sebi723g00019 641 Pfam Myb-like DNA-binding domain 91 121 IPR001005 -
Sebi723g00019 641 Pfam Myb-like DNA-binding domain 38 85 IPR001005 -
Sebi723g00019 641 CDD SANT 40 85 IPR001005 -
Sebi723g00019 641 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 90 120 IPR017930 -
Sebi723g00019 641 SUPERFAMILY Homeodomain-like 39 115 IPR009057 -
Sebi723g00019 641 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 228 IPR017930 -
Sebi723g00019 641 CDD SANT 93 120 IPR001005 -
Sebi723g00019 641 FunFam MYB-related transcription factor 37 90 - -
Sebi723g00019 641 SMART sant 90 226 IPR001005 -
Sebi723g00019 641 SMART sant 37 87 IPR001005 -
Sebi723g00019 641 MobiDBLite consensus disorder prediction 360 398 - -
Sebi723g00019 641 MobiDBLite consensus disorder prediction 360 430 - -
Sebi723g00019 641 ProSiteProfiles Myb-like domain profile. 86 130 IPR001005 -
Sebi723g00019 641 Gene3D - 37 90 - -
Sebi723g00019 641 MobiDBLite consensus disorder prediction 469 487 - -
Sebi723g00019 641 ProSiteProfiles Myb-like domain profile. 36 85 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi723g00019 Sebi-Chr723 449618 453690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi723g00019 74 640 MYB Transcription Factor Family AT5G06100 31.379 3.77e-61 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi723g00019 Myb_DNA-binding 4.2e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi723g00019 K09422 - gmx:100810415 645.195