Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi723g00010 ATGCCTATCTCTGTTCTGCATCAAGGGATATGGCCAGAGTCTCCAAGTTTTAGTGATGTGGGAATGGGGAAGATTCCTTCAAAATGGAAAGGAGTTTGCATGGAGGGTCATGATTTCAAGAAATCTAACTGCAATAGAAAATTGATAGGTGCAAGATACTATAAAACCCAAGTTACATCAGGTGGAAATCAGACTCATATTGAAGCAGCCAAAGGTTCCCCAAGAGATTCTATTGGACATGGAACTCACACTGCATCAACAGCAGCTGGTGTCCAAGTCAACAATGCTAGTTATTATGGTTTGGCAAAAGGAACAGCAAGAGGTGGTTCACCTTCTACTAGGATTGCTGCCTATAAAACATGCTCAGAAGAAGGCTGCTCTGGTGCTACCATACTAAAGGCTATTGATGATGCTATTAGGGATGGAGTAGATATAATCTCAATCTCTATTGGACTTAGCTCATTAATGCAATCAGATTTTTTGGATGATCCTATAGCCATTGGAGCATTTCATGCAGAACAAATGGGGGTCATGGTGGTCTGCTCAGCTGGGAATGATGGTCCTGATCCTTACACAGTTGTGAACACAGCACCATGGATATTTACAGTTGCAGCTTCTAATATTGATAGGAACTTCCAATCAACTGTTGTCCTTGGAAATGGGAAAACTTTCCAAGGTACTGGCATTAACTTCTCAAACCTTACTCGTTCAAAGATGTATCATCTTGTCTTTGGAGAGGAAGTTGCTGCCAAATTTGCCCCTGCTTCAGAAGCTAGGAACTGTTATCCTGGATCACTAGATTACAACAAAGTTGCAGGAAACATTGTTGTTTGTGTTAATGATGATCCAAATATTTCAAGGAGAGTCAAGAAACTAGTTTTACAAGATGCAAGAGCCATGGGCATGATACTCATTGATGAGGACAACAAAGATGTTTCCTTTGATGCAGGTGCATTTCCATTCACAGAAGTTGGAAATCTTGAAGGGTATCAGATCCTTGAGTACATAAATACTACTAAGAACCCAACTGCAACAATTCTTCCAACATCAGAAGTTCCTAGATATAGGCCTTCACCAATTGTTGCATCTTTCTCATCCAGAGGTCCTTCAAGCCTTACAGAAAACATTCTCAAGAGAAAGTATCTTGAGAACAATGCACTCACTGTTTCTCTTTCACTAATCTGTTGTCCAGCCAGATGTCATGGCTCCAGGTGTTGGAATTTAGCTGCCATGATTCCCAAAACTGATGAACCAGGAAGTGTTCCAATTGGGAAAAAGCCATCTTTGTTTGGCATAAAATCTGGCACATCCATGGCTTGCCCACATGTGACAGGTGCTGCAGCATTCATCAAATCAGTACATGGAAGATGGAGTCCTTCAATGATCAAATCAGCATTGATGACAACAGTCACAACCTACAACAACATGAGGAAGCCTGTGACCAACAGCTCAAACTACTTTGCCTACCCACATGAAATGGGAGTAGGGGAAATTAATCCACTTAGAGCTCTCAACCCTGGTTTAGTCTTTGAAACAGGTGTGGAAGACTATGTCAGATTCCTTTGTTATTATGGCTATTCAAAGAAAAACATAAGGTCAATGTCTAAGACTAATGTCACATGCCCAAGAGACTCCTCTGAAGATCTTATCTCCAACATCAATTACCCATCAATCTCTACAAAATTACTTAAAAAACAAAAGAAACCAAAAGTGATCACAAGAACAGTTACCAATGTGGGATCCCTTAATGCCACATATACTGCAAAGGTGCATGCACCTGAGGGATTGGTTGTCAAGGTCATCCCCAACAAACTTGTGTTTTCTGAGGGTATTCAAAGAATGACCTATGAAGTCTCATTCTATGGCAAGGAAGCCCATGGTGGATACAATTTTGGGTCTCTAACTTGGCTTGATGGTCGACATTATGTTCATACAGTATTTGCAGCCAAAGTTGAATAA 1959 0.4079 MPISVLHQGIWPESPSFSDVGMGKIPSKWKGVCMEGHDFKKSNCNRKLIGARYYKTQVTSGGNQTHIEAAKGSPRDSIGHGTHTASTAAGVQVNNASYYGLAKGTARGGSPSTRIAAYKTCSEEGCSGATILKAIDDAIRDGVDIISISIGLSSLMQSDFLDDPIAIGAFHAEQMGVMVVCSAGNDGPDPYTVVNTAPWIFTVAASNIDRNFQSTVVLGNGKTFQGTGINFSNLTRSKMYHLVFGEEVAAKFAPASEARNCYPGSLDYNKVAGNIVVCVNDDPNISRRVKKLVLQDARAMGMILIDEDNKDVSFDAGAFPFTEVGNLEGYQILEYINTTKNPTATILPTSEVPRYRPSPIVASFSSRGPSSLTENILKRKYLENNALTVSLSLICCPARCHGSRCWNLAAMIPKTDEPGSVPIGKKPSLFGIKSGTSMACPHVTGAAAFIKSVHGRWSPSMIKSALMTTVTTYNNMRKPVTNSSNYFAYPHEMGVGEINPLRALNPGLVFETGVEDYVRFLCYYGYSKKNIRSMSKTNVTCPRDSSEDLISNINYPSISTKLLKKQKKPKVITRTVTNVGSLNATYTAKVHAPEGLVVKVIPNKLVFSEGIQRMTYEVSFYGKEAHGGYNFGSLTWLDGRHYVHTVFAAKVE 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi723g00010 652 Pfam Fibronectin type-III domain 552 645 IPR041469 -
Sebi723g00010 652 Gene3D - 209 353 - -
Sebi723g00010 652 PRINTS Subtilisin serine protease family (S8) signature 434 450 IPR015500 -
Sebi723g00010 652 PRINTS Subtilisin serine protease family (S8) signature 76 89 IPR015500 -
Sebi723g00010 652 ProSiteProfiles Serine proteases, subtilase domain profile. 1 504 - -
Sebi723g00010 652 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 644 IPR045051 -
Sebi723g00010 652 FunFam subtilisin-like protease SBT1.5 209 352 - -
Sebi723g00010 652 SUPERFAMILY Subtilisin-like 3 508 IPR036852 GO:0004252|GO:0006508
Sebi723g00010 652 Gene3D - 521 651 - -
Sebi723g00010 652 CDD PA_subtilisin_like 215 346 - -
Sebi723g00010 652 Gene3D Peptidase S8/S53 domain 3 517 IPR036852 GO:0004252|GO:0006508
Sebi723g00010 652 ProSitePatterns Serine proteases, subtilase family, serine active site. 435 445 IPR023828 -
Sebi723g00010 652 Pfam Subtilase family 61 474 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi723g00010 Sebi-Chr723 272835 275810 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi723g00010 3 647 Subtilisin-like Serine Gene Family AT1G20150 41.945 1.26e-165 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi723g00010 K25898 - gmx:100809885 1043.11