Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi723g00009 ATGACGGGTGTTGAGCCAACATTTGAGGAAAGTAATTGTGTTGCTGTTGAAAGGCTCGCGAGTGAGTGTGGGTCAAGAAGCGGCATGACACACGCTCTGTTGGGATTGAAGTTATGGTGGAGGGTGGGTAAGTGTGAGGGAAAGTATGAGTTTAAGTCTATCACATGGGATAGTCATGCCTTAGAAATGGTTAATTATGCCATTGCTCATAACATTGAGGTTAATATTGTGGTGGAGCATGTTTCTGTAGCAGTACCTAATGTGATAAAGGCTTTACTTGGCCCTGAGGACAAGGGTAAGGCTGTTGAGGTGGGAGATGGGAGTTTGGAAGATTCTAGGAGTGAAGAGAGTATTGATGGGAGTTGGGAAGATTTTTTGTTTGATGACAGTGAAGATGAAAGCATATTTCAAAGTGTTGATGGTTTTGGTGAAGGTGAGACAGGGTATGTTGGAAATGAACAAACTGAGGAGGTTGATGGAACTTTGCACACTGATGGAGTCCTTAACACTGAGGCAACCCCACATAATGGTGGTGGAACCTCACAAACTGGTGGAGTCCCTAACACTGAGGCAACCCCACATAATGCTGGTGGAACCTCACAAACTGAGGGAGTCCCTCACATTGAGGCAACTCCACATAATGAGGGACCTTCACAAACTGATGCTACTCCACAAAGCGAAGAGGATCCTCCTCATCCTGGTCCATTTTCTTTTGGGGCTTCCTCCCATTCGCCTACTGTTTCTCCTTTTTTTGTAATGGAAGGAGGGTTGGGTCCAAACCCAAACCCTGCGTCAGGTTCAATCGATAGATCTAAAATCGTAGAGGTTAAACCTCTGCGTAGTTTGGCACCTGTGTTCCCAAAATCTCTTCAATCTTTCTTCTCTGGCCGGTATCCATCTGGTTTTCCTCCATTTATTTCATCAGAGGAACCTCAAGAACCTCCTATTCCCAAACCTGCTCCACTAAGGTGCTACAGGAGTTCATCAGTTGAAGAAACAACCCCAGATGGAGTTAATGGAGTTAATGCTTCATCTGTAGATGGGTTCAATGGTGACCATGTTGCTGATAACCAAAAGCGTGCAGCATCACCTTTACAGAGCTGCAAATCATCCCAAAAGAGGAATAAGAAAACTCAGGAGTCACAGGTTAATCATCCAAGTTCTTTTGTTGGTATTAACCCAGCCCAAAAAGATGATGGTGATCGTGAAGCAGTTAATCTTGTACTCATGACATTTGACTCACTTCGAAGAAGGCTCTGCCAACTCGAAGATGCTAAGGAATTGAACACAACAGGTGCAATCAAGCGTGCAGATTTAAGAGCAAGCAATGCTTTGACGTGCAAAGGGGTTCGGACAAACACAATGAAGAGAGTGGGGGTGGTGCCTGGGGTTGAGATTGGGGACATTTTCTTTTTTCGAATGGAAATGTGTCTTGTGGGCTTACATGGCCAGTCAATGGGTGGAATTGACTACATGACTATCAAAGATGAGAATCAGGAGGAACCTGTGGCTATAAGCATTGTTTCATCAGGAGTATATGATAATGATGCAGAGGATAATGATGTTTTAATTTATAGTGGTCAGGGAGAGAATTTCAACAAGAAAGATAAATATGTGACTGATCAAAAGCTTCAAAGGGGTAATCTTGCTTTGGACAAAAGTTCGAGGCGACACAATGAAGTGAGAGTCATCCGGGGCTTGAGAGATGCTATGAATAAAACTGCAAAAATCTATGTGTATGATGGTCTTTATAAAATCCAAGATTCTTGGATAGAAAGGGGCAAATCCGGTGGTGGTGGTGGTGTATTTAAGTATAAGTTCGTGAGGTTGCCTGGACAACCCAGTGCTTTTGCTAATTGGAAATTGGTTCAGAAGTGGAAGGAAGACTCTGCTTCAAGGAATGGTTTTATTCTTGCAGATCTTTCCACAGGAGTTGAGAGTATACCGGTATCACTGGTCAATGATATTGATAATGAGAAAGGGCCTGCATTTTTCTCTTATTTCCATTCTCTCAGAAATCCAAAACCTTTTGGTTTAATGCAGCCTTCGTATGGCTGCAATTGTAACAAAGCATGCGTCCCAGGAGATTTGAGCTGCTCTTGTATTCAAAGAAATGAAGGTGATTTTCCATATACTGCAAATAGTATACTGGTGAGTCGGAAGCAATTGGTGCATGAATGTGGCCCCATGTGTCGTTGTCTTCCTAACTGCAAAAATCGAGTATCCCAGGCGGGTTTAAAGCACCACATGGAAGTGTTCAAAACAAAGGATAGAGGGTGGGGACTTCGATCATTGGATCCTATACGTGCTGGTACTTTTATTTGTGAGTATGCAGGAGAAGTTATTGACAGAGCCAAGGTATATTATAACGATGAGTATGTTTTTGATACAAGTCGTATTTATGAACCGTTCAAGTGGAATCATGAACCTAGCTTACTGGAAGAAGTAAGTTCAAATGTATCTAGTGAGGATTATACTTTACCATCTCCTCTAGTAATAAGTGCCAAGGATGTTGGAAACGTGGCTAGATTCATGAATCATAGTTGCTCTCCAAATGTTTTCTGGCAGCCAGTCCTGCATGCAGAAAACAACCAATCCTTTCTTCACATCGCATTTTTTGCCCTTAGACACATTCCTCCAATGACAGAGTTAACATATGATTATGGCGTTGTCCGTTCTGGTCATGCTGAGGGTAGCAGTGCACCCAAAGGGAGAAAGAAGTGCTTGTGTGGATCATCAAAATGCCGTGGTTCTTTTGGTTGA 2763 0.4289 MTGVEPTFEESNCVAVERLASECGSRSGMTHALLGLKLWWRVGKCEGKYEFKSITWDSHALEMVNYAIAHNIEVNIVVEHVSVAVPNVIKALLGPEDKGKAVEVGDGSLEDSRSEESIDGSWEDFLFDDSEDESIFQSVDGFGEGETGYVGNEQTEEVDGTLHTDGVLNTEATPHNGGGTSQTGGVPNTEATPHNAGGTSQTEGVPHIEATPHNEGPSQTDATPQSEEDPPHPGPFSFGASSHSPTVSPFFVMEGGLGPNPNPASGSIDRSKIVEVKPLRSLAPVFPKSLQSFFSGRYPSGFPPFISSEEPQEPPIPKPAPLRCYRSSSVEETTPDGVNGVNASSVDGFNGDHVADNQKRAASPLQSCKSSQKRNKKTQESQVNHPSSFVGINPAQKDDGDREAVNLVLMTFDSLRRRLCQLEDAKELNTTGAIKRADLRASNALTCKGVRTNTMKRVGVVPGVEIGDIFFFRMEMCLVGLHGQSMGGIDYMTIKDENQEEPVAISIVSSGVYDNDAEDNDVLIYSGQGENFNKKDKYVTDQKLQRGNLALDKSSRRHNEVRVIRGLRDAMNKTAKIYVYDGLYKIQDSWIERGKSGGGGGVFKYKFVRLPGQPSAFANWKLVQKWKEDSASRNGFILADLSTGVESIPVSLVNDIDNEKGPAFFSYFHSLRNPKPFGLMQPSYGCNCNKACVPGDLSCSCIQRNEGDFPYTANSILVSRKQLVHECGPMCRCLPNCKNRVSQAGLKHHMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVIDRAKVYYNDEYVFDTSRIYEPFKWNHEPSLLEEVSSNVSSEDYTLPSPLVISAKDVGNVARFMNHSCSPNVFWQPVLHAENNQSFLHIAFFALRHIPPMTELTYDYGVVRSGHAEGSSAPKGRKKCLCGSSKCRGSFG 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi723g00009 920 SMART set_7 748 895 IPR001214 GO:0005515
Sebi723g00009 920 SUPERFAMILY PUA domain-like 442 630 IPR015947 -
Sebi723g00009 920 SMART preset_2 638 732 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi723g00009 920 MobiDBLite consensus disorder prediction 166 268 - -
Sebi723g00009 920 SMART G9a_1 454 613 IPR003105 -
Sebi723g00009 920 MobiDBLite consensus disorder prediction 327 346 - -
Sebi723g00009 920 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 442 628 - -
Sebi723g00009 920 Gene3D SET domain 630 919 IPR046341 -
Sebi723g00009 920 MobiDBLite consensus disorder prediction 307 397 - -
Sebi723g00009 920 ProSiteProfiles YDG domain profile. 459 609 IPR003105 -
Sebi723g00009 920 Pfam SET domain 759 889 IPR001214 GO:0005515
Sebi723g00009 920 SUPERFAMILY SET domain 647 917 IPR046341 -
Sebi723g00009 920 ProSiteProfiles Pre-SET domain profile. 684 745 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi723g00009 920 Pfam Pre-SET motif 642 740 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Sebi723g00009 920 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 214 920 IPR025794 GO:0016571
Sebi723g00009 920 MobiDBLite consensus disorder prediction 99 120 - -
Sebi723g00009 920 ProSiteProfiles Post-SET domain profile. 904 920 IPR003616 -
Sebi723g00009 920 Pfam SAD/SRA domain 458 613 IPR003105 -
Sebi723g00009 920 MobiDBLite consensus disorder prediction 166 226 - -
Sebi723g00009 920 ProSiteProfiles SET domain profile. 748 889 IPR001214 GO:0005515
Sebi723g00009 920 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 314 914 - -
Sebi723g00009 920 Gene3D - 441 627 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi723g00009 Sebi-Chr723 255190 260156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi723g00009 391 920 Su(var)3-9 homologs AT5G04940 60.413 0.0 675
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi723g00009 SAD_SRA 1.1e-45 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi723g00009 K24405 - gmx:100800651 1055.43