Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi721g00030 ATGAGTCAGCCTAAAATTAAGCGCCGAGTTGGTAAATATGAGGTTGGGAGGACCATTGGTGAGGGAACATTTGCAAAGGTGAAATTTGCAAGAAACTCTGAGACAGGGGAGCCTGTGGCTCTCAAAATTCTTGACAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAGCAG 171 0.4561 MSQPKIKRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQ 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi721g00030 57 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 9 56 - -
Sebi721g00030 57 SUPERFAMILY Protein kinase-like (PK-like) 5 55 IPR011009 -
Sebi721g00030 57 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Sebi721g00030 57 Gene3D Phosphorylase Kinase; domain 1 2 57 - -
Sebi721g00030 57 ProSiteProfiles Protein kinase domain profile. 13 57 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi721g00030 Sebi-Chr721 482390 482560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi721g00030 5 57 CBL-interacting serine-threonine protein kinases AT2G26980 96.226 1.17e-29 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Sebi721g00030 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi721g00030 - - pop:18094946 114.775