Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi721g00022 ATGGTTTTGCCAACGGACTTCATTGTTGACATTGATTCATCGAAAGAATCGTGGCATATTGTTGCGAGAGTTGTTCGTTTGTGGAAAATTCCCAATTTCCACAATGCAAAAATCCCCCTTGCTTTGGAGATGGTTCTTTGTGATGAGAGGGGTGGAAAAATTCACGCTGTTGTCCGAAGAACTCTGGTGTACAAATTTCAATCGACCCTAATTGAGGGAGCTGCTTATTCCATTTCTAATTTTGGTGTTGGTGAAAATTCTGGTGAGTTCAAGTATTCTATGCATTTGTACAAGGTGAACTTCGAATACCATACAAGAGTTGTTTTGATGAGGGACTGCACTATACCCCGATTTCAATTTTCATTTGTGTCTTTGGCGGATGTAATGGCACCTTCTTTTGACAACAATTATTTAGTCGATGTAATCAGAGTCTTGACTGGTATTGGTACTGAGAAGGAGTATGAGAGGAATCGGAAGAAATTTCGCATGAATGTCATGGAATTGGAGATTGATGGATTTGGTATACTAATATTTATTGGTCAAATTACGTCGAAAATAGAATATGCTCTGTTTGAAAATTATCTTGATGATTTGAATGCATTCCTTGCTTCCGGTAATACTACAAATGTGATTGTTGTAGTACAGCTTGCAAAAGTCAAGTCATTCAAAGGGAAAGTGTCTTTGCAAAATTCTCTCCATGCTACTAAGTTGATCTTCAATCCTGACTTTGAAAAAGCTGTGGAATTAAGGAAAAGGCTTGAAGAAAACATTGAGTCTGTCTCGCAACCCTTAAGTCAAATTGCTGAAGTTCCTAAGTTGACAATGAAGGAGGAGTTTTTGACTCATACTGTGATGAAGACTATTGAGGAGCTAAAGGACTCTAATGAGGAATGTTGTTGCATTGTCATGGCTACGATTAAACATCTTATTGAAGGAGAAGACTGGTGGTATCGTCTGAAGGTTCGTGTGATTGATACAACCGATTCTGCAACATTAGTAATCTTTGATCGAGATGCTGCATCTCTTTTAAACATAAGTTGTTATGATTTGTTGGAGTCTACTGCCCAGCCCAATGATAAGAGTTTCCCTGCTGAAATATCTGCATTGGTTGATCAAACTTTTCTGTTCAAAGTTGAAAATAAGATTGTCTCCAACTCTCGGTTTGAGACATCTTACAAAGTTAGGAGGGTTTGCTCGGACAGTGAACTGATTCAACAATTTAAGGACATTCATTTCTCCAAAAAAACTGATGACTCTTTGGACTATGTCATTTCTGATAGCCAACAATTAGTTGGAGTTGATTTATCTAATGATCTGCCAAAACAGGATTTTTTGACCCAGTTATCTCAGTCAGTCAATGATGATGGAATTAATACTGTTTTAATGGGAACTGGTGATGGAGAAGGACTGGCAATGGATTATGAGTCTGTCACTCCATGTAAAAGAAATTCTGCTGAATGTAGTGATGAACCAATTGATGCCTCATCATCTGTCAAGTTGAAGAAGGTTATCAAACAAGAGAAAGAGTGA 1530 0.3778 MVLPTDFIVDIDSSKESWHIVARVVRLWKIPNFHNAKIPLALEMVLCDERGGKIHAVVRRTLVYKFQSTLIEGAAYSISNFGVGENSGEFKYSMHLYKVNFEYHTRVVLMRDCTIPRFQFSFVSLADVMAPSFDNNYLVDVIRVLTGIGTEKEYERNRKKFRMNVMELEIDGFGILIFIGQITSKIEYALFENYLDDLNAFLASGNTTNVIVVVQLAKVKSFKGKVSLQNSLHATKLIFNPDFEKAVELRKRLEENIESVSQPLSQIAEVPKLTMKEEFLTHTVMKTIEELKDSNEECCCIVMATIKHLIEGEDWWYRLKVRVIDTTDSATLVIFDRDAASLLNISCYDLLESTAQPNDKSFPAEISALVDQTFLFKVENKIVSNSRFETSYKVRRVCSDSELIQQFKDIHFSKKTDDSLDYVISDSQQLVGVDLSNDLPKQDFLTQLSQSVNDDGINTVLMGTGDGEGLAMDYESVTPCKRNSAECSDEPIDASSSVKLKKVIKQEKE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi721g00022 509 Gene3D - 6 108 IPR012340 -
Sebi721g00022 509 Coils Coil 151 171 - -
Sebi721g00022 509 Gene3D - 314 410 IPR012340 -
Sebi721g00022 509 SUPERFAMILY Nucleic acid-binding proteins 119 258 IPR012340 -
Sebi721g00022 509 CDD RPA1_DBD_A_like 20 107 - -
Sebi721g00022 509 CDD RPA1_DBD_B_like 140 253 - -
Sebi721g00022 509 Pfam Domain of unknown function DUF223 43 135 IPR003871 -
Sebi721g00022 509 SUPERFAMILY Nucleic acid-binding proteins 8 112 IPR012340 -
Sebi721g00022 509 Gene3D - 114 262 IPR012340 -
Sebi721g00022 509 SUPERFAMILY Nucleic acid-binding proteins 308 382 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi721g00022 Sebi-Chr721 403420 405930 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi721g00022 8 250 Core DNA Replication Machinery Family AT2G06510 25.806 3.29e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi721g00022 - - vun:114180582 342.043