Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi721g00008 ATGTCTGTGTGTTGTTTGATGCTTGGATTAGGAGCTACTAGAAAAGGCATGCAGGCTATCTGGTTGATGCTGTTTTTGTTGGTGGCTATTGTGTTGGGAAATTCAGATATTGATGCACTCCTTGAACTCAAGAAGAGTATTCAGAATGACCCTTCTGGATTAGTTTTAAATTCTTGGGATTCAAAGTCTTTAGATTCAGATGGGTGTCCTCAGAACTGGTATGGGATATTGTGCACTGAAGGCAGTGTTATATCAATCACTCTGGATAATGCTGGTTTGTTTGGAGAGTTCAATTTCCTTGCCATTAGTGGCCTTACAATGCTCCGGAACTTGTCAGTTGTGAACAACCAGTTCACAGGAAGTATCATACATATTGGTCCAATGAAATCACTTGAATTTCTTGATTTGTCCTGCAACAAGTTTAATGGGTCATTACTCTCTAACTTTGTTGAATTGCATAATTTAGTATATCTGAATCTTTCTTCAAATGAATTTAGTGGTACTCTTTCTATTGGGTTTCACAAACTTGAGCAGTTGAAGTATTTAGATTTGCACACTAATAACTTTTCTGGGGATATTACGCATATCTTATCCCAGATGGGCAGTGTGCTACATGTTGACTTAAGCAGCAACAGGTTTTCTGGGACACTGGATTTGGGACTTGGAGATGACTCCTTTCTTTCCTCAATTCAATATTTAAATGTTAGCTACAATTCCTTGATTGGTGAGCTATTTGCTCATGATGGTATGCCATACCTTGACAATTTAGAGGTCCTTGATGCTAGTAATAATCAGCTAGTGGGTCATATACCTTCCTTCACCTTTGTGGTATCTCTAAGGATTCTTCGACTTGCATGCAACCAGTTGACAGGTTCACTGCCTGAAACTTTATTGAGGGAAAGTTCAATGATGTTGTCTGAGCTGGATCTTAGTCAAAACCAGCTTGAAGGTCCCATTGGAAGTATTACCTCAGTAACTCTCAGGAAGCTTAATATATCTTCAAACAAATTGTCAGGCCCCTTACCTCTCAGGGTAGGCCACTGTGCCATCCTAGATTTGAGTAACAACATGCTGTCAGGTAATGTGTCAAGGATTCAGTATTGGGGTAACTATGTTGAAGTTATTCAGCTAAGTACAAACTCATTGACAGGAATGCTGCCAAATGAAACTACTCAATTTTTAAGGTTAACTGCTCTTAAGGTATCCAATAACTCATTGGAGGGCTTTCTCCCACCAGTCTTGGGAACATATCCAGAACTAAAAGAGATTGATCTTAGCCTCAACCAGCTTTCTGGGTTCCTCCTACCAAGCTTTTTCACCTCAATCAAGTTGACTAATCTTAACCTCTCGAACAATAAGTTTTCCGGACCAATTCCTGTTCAACTTCAACTTCCAAATAATCCATTAGTTTCTTCTGAAAATTTTAGTCTGGTGTTTCTTGATCTTTCAAACAACAACTTAAGTGGGCCTCTTCCTTCAAAAATGTATAAGCTTCACAATTTAGCATATCTCAATCTATGTAACAACAAATTTGAAGGTACTATTCCTGATGATCTTCCAAATGAGTTGAGAGGATTCAATGTGTCCTTCAATAATCTCTCTGGTGTTGTCCCAGACAACTTGATCCAGTTTCCTGAATCAGCATTTCATCCGGGAAATACTATGCTGATATTTCCACATTCACAATTATCACCAAAAGATAATTCCAACCTGGATTTGAGGGAACATGGGTTACACAAAAGATCTGCAACTAGGAGTGTCTTGATTGCATGTCTGGTTACTGGTGCTATTGTGATGGCTATTGTGGGTATAATGACTTATTATAGGGTCCATCAAAAAACAGAAGGGACTTCTAAACAAAATGCACCAAGTGGCATCATCCAAGAGAGTACTTCCACAACAAAGACAGAAGCACCTAGCAGAAATTTGGAGTCATTACCACCTTCTCAAAAGCAGTCAGCTGATGATACCAGAAACATTCATCCAATAGCAAAAAAGCCAAAAGATTTTGATCATCCTGAATTAGTTAAGAATGAGGAAGGAACTTCTTCTCCAATGTCTATTTTGTCAGCTTCAAATCCTTCATCTTCTAAAAGCCATCAGTTTGAGAATCCTGGCAACCTCAAAGTATCATCCCCAGATAAACTGGTTGGGGACTTGCATCTATTTGATGGATCCTTGGTGCTGACTGCAGAAGAACTTTCATGTGCTCCAGCAGAAGTTGTTGGCAGGAGTTGTCATGGAACACTCTACAAAGCCACACTTGATTCTGGTCATACATTGGCTGTCAAATGGTTAAGAGAAGGAATAACTAAAGGTAAAAAGGAGTTGGCAAGAGAAATAAAGAAACTTGCAACTATCAAGCATCCAAGCCTGGTTTCTGTTCAGGGTTACTACCTAGGGCCAAAGGAGCATGAGAGACTGATTATATCAAATTACATGAATGCACAATCTTTGGACATTTATCTCCATGAGGCAGATAAAAGAAATCTCCATCCTTTGTCTCTTGATGAAAGGCTCAGGGTGGCAGTAGAGGTAGCGCGATGTCTGCTTTACCTACACGATGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATTCTACTAGAAACTCCTAACAGAAATGTCCTCATCACTGACTACAGCCTGCACAGAATACTTACTGCTTCTGGTACTGCTGAGCAAGTTCTGAATGCTGGTGCACTTGGTTATCGGCCACCCGAGTTTGCTAGATCAAGCAAACCATGCCCTTCCTTGAAGAGTGATGTCTATGCATTTGGTGTTGTCTTGTTAGAGCTCCTAACAGGAAGAAATTCTGGAGAAATAGTTTGTGGTATTCCAAGGGTGGTTGACCTTACTGACTGGGTGAGGTTCTTAGCTGAACATGATCGTTCTAGCCAGTGCTTTGAGAGGTCCCTTTTGGACAAGCAAAATGGATCAGAAAGATCATCTAGGATTCTTGATGACATGCTAAAAGTGGCTCTTAGATGCATCCTTCCAGCATCTGAGAGGCCTGACATGAAAACAGTCTTTGATGAGCTTTCAACAATAAGGTAG 3063 0.4012 MSVCCLMLGLGATRKGMQAIWLMLFLLVAIVLGNSDIDALLELKKSIQNDPSGLVLNSWDSKSLDSDGCPQNWYGILCTEGSVISITLDNAGLFGEFNFLAISGLTMLRNLSVVNNQFTGSIIHIGPMKSLEFLDLSCNKFNGSLLSNFVELHNLVYLNLSSNEFSGTLSIGFHKLEQLKYLDLHTNNFSGDITHILSQMGSVLHVDLSSNRFSGTLDLGLGDDSFLSSIQYLNVSYNSLIGELFAHDGMPYLDNLEVLDASNNQLVGHIPSFTFVVSLRILRLACNQLTGSLPETLLRESSMMLSELDLSQNQLEGPIGSITSVTLRKLNISSNKLSGPLPLRVGHCAILDLSNNMLSGNVSRIQYWGNYVEVIQLSTNSLTGMLPNETTQFLRLTALKVSNNSLEGFLPPVLGTYPELKEIDLSLNQLSGFLLPSFFTSIKLTNLNLSNNKFSGPIPVQLQLPNNPLVSSENFSLVFLDLSNNNLSGPLPSKMYKLHNLAYLNLCNNKFEGTIPDDLPNELRGFNVSFNNLSGVVPDNLIQFPESAFHPGNTMLIFPHSQLSPKDNSNLDLREHGLHKRSATRSVLIACLVTGAIVMAIVGIMTYYRVHQKTEGTSKQNAPSGIIQESTSTTKTEAPSRNLESLPPSQKQSADDTRNIHPIAKKPKDFDHPELVKNEEGTSSPMSILSASNPSSSKSHQFENPGNLKVSSPDKLVGDLHLFDGSLVLTAEELSCAPAEVVGRSCHGTLYKATLDSGHTLAVKWLREGITKGKKELAREIKKLATIKHPSLVSVQGYYLGPKEHERLIISNYMNAQSLDIYLHEADKRNLHPLSLDERLRVAVEVARCLLYLHDEKAIPHGNLKSTNILLETPNRNVLITDYSLHRILTASGTAEQVLNAGALGYRPPEFARSSKPCPSLKSDVYAFGVVLLELLTGRNSGEIVCGIPRVVDLTDWVRFLAEHDRSSQCFERSLLDKQNGSERSSRILDDMLKVALRCILPASERPDMKTVFDELSTIR 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi721g00008 1020 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 248 476 - -
Sebi721g00008 1020 Gene3D Phosphorylase Kinase; domain 1 742 814 - -
Sebi721g00008 1020 MobiDBLite consensus disorder prediction 614 710 - -
Sebi721g00008 1020 MobiDBLite consensus disorder prediction 680 708 - -
Sebi721g00008 1020 MobiDBLite consensus disorder prediction 658 678 - -
Sebi721g00008 1020 Pfam Protein tyrosine and serine/threonine kinase 740 961 IPR001245 GO:0004672|GO:0006468
Sebi721g00008 1020 SUPERFAMILY L domain-like 55 360 - -
Sebi721g00008 1020 PANTHER OS07G0626500 PROTEIN 21 114 - -
Sebi721g00008 1020 Gene3D Ribonuclease Inhibitor 473 562 IPR032675 -
Sebi721g00008 1020 Gene3D Transferase(Phosphotransferase) domain 1 815 1020 - -
Sebi721g00008 1020 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 33 242 - -
Sebi721g00008 1020 MobiDBLite consensus disorder prediction 614 657 - -
Sebi721g00008 1020 ProSiteProfiles Protein kinase domain profile. 736 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi721g00008 1020 Gene3D Ribonuclease Inhibitor 35 197 IPR032675 -
Sebi721g00008 1020 Gene3D Ribonuclease Inhibitor 370 472 IPR032675 -
Sebi721g00008 1020 FunFam Leucine-rich repeat receptor-like protein kinase 721 813 - -
Sebi721g00008 1020 SUPERFAMILY L domain-like 351 544 - -
Sebi721g00008 1020 Gene3D Ribonuclease Inhibitor 198 369 IPR032675 -
Sebi721g00008 1020 SUPERFAMILY Protein kinase-like (PK-like) 740 1016 IPR011009 -
Sebi721g00008 1020 Pfam Leucine rich repeat N-terminal domain 34 78 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi721g00008 Sebi-Chr721 181483 185270 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi721g00008 346 545 Receptor kinase-like Gene Family AT3G51740 34.804 8.22e-21 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi721g00008 PK_Tyr_Ser-Thr 5.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi721g00008 - - gmx:100781394 1665.2