LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi720g00011	ATGATGGAACCTACTGAAACTGAAAAAACTTTTGAGGTTGATCCCAAAAATTCTAAATCCCCCAATAAAGATAATTTGGATTCTGATAAGATTCCTGAAGGTTACAAAAGGATAAGTGAACTAACAGATGAGGATATCAGAGGGCTTGAGTTTGATACAGAAGAGGATGCATATGATTTCTACCGTGAGTATGCTAAATTCATAGGATTTTCTGTTAGGAAAGGTGATGTCTATAGAAATTGTAATGGTTCAATTACAATGAGGCAATTGGTTTGTAATAGAGAGGGAGAGAGAAGTGAGAAGCATCTTAATAGGACTGATAGACTTAGGGAGGCAAAGGCTTTGACCCGAACTGGTTGTAAAGCAAGGCTCCGTGTTTCCTTAGATTATAGAAGTAGAAAGTGGAGGGTTGGAATCTTTGAGCCAGCTCACAACCATGAATTGACTCCTGAAATTATGATACATTTTCTACCTGCTTATCGTGGGTTGAGTGTAGCTGATAAGGCACAAGTTGATTGTATACATCATTATGGTGTTAGGACTTGTCATATAATGGGTCTTATAATGGTTCAAAAGGGAGGCTATTCTGATCTTGGTTTTTGTAAGAAGGATTTGTACAGTCATATTGATAAAGATAATCGGGAAAAAATAGACGATGGGGATGCTTTTGCTGCGTTGTGTTACCTTCAATCAAATCGTCAAAAGTTTGAGGATGAGTGGAACAAGGATGTTGACAAACATGGTTTGAGGGAAAATAGGACAACTTCTATATGTGAAGGAATTAACTCATTCATTAAGAGACACAACGAGTTAACTTCAGATTTCAAGTCGAAATACACTCAACCTATGATGACTACTACTTTGGAAAGATATGAAGTTCAAGCTTCAAATGTCTACACGAGGAATAAGTTTTTTGATGTTCAAAAGCAAATTGAGAAAGTTGATGCCATAAATGTGATTGAGAGGATGGATGTTGGTAATTGCTATGAGCATGAGCAAGTGGAATCCATTCCTGCATCTTTGATTTTGAAAAGGTGGACTAAGTTGGCTAAAGTTGAACACATTTCTTCTGTTTATGCTGAAGAAGGTGACACATCAAAGAAAGACTTATTGAGGTCCGGTGCTGTTGGTGTTGCATGTAACAGGCTTAACAAGGTTGCCCGTAGAAATCCTCTCAATTTTGTAAAGAACATTGAATCTATTCATAATTTAGCAGAACAGATAGAAAGGCAGGAAAGTATTGACTTGAACATTATTGATATATCAAGAGTTGTCTGTGACCCAACTGTTGTTAAAACTAAAGGCCACACAGTTAGGACATGCACTAAATATGCTACTCGTGATCAGTTGGATACAGTTATTGAAGAGGAATCATCTGTTGAGACTGATGAAGATTCAAGAGATGAAAGTAGGTCACGGGATGTTCTCATTTCTAACCATTTGAATGATGTAACAGTCTCTGCTGGTCAGAATTGTGCTTCAGACAAGGGTCAGTCTAAGAAGAGAAGGAAAAATAGTCAAGGGTTGAAATTGACCCAAGAATCAGTTAATGAAAGGAGGTCCAGTGATGTGAACAAAGGTCAACAGAATGATACTGGTATTGCATTCAGCGGAATGAATACCCCCTCCTTATTTAGTAATCATCTGTACTATTCAAACGTGAATGGTCCGAGTATTTCAAGACCTGTGCATATTAGACCTTCAATGATTCATGGATTTGGTCAAGGATTTGTTGGTAATAGAGTTGAGGACATGGTACAGTATCCCCAAATGTATATGCAACAATCTCTGTATACACCTCCAGTAGTTCACAATTTTAACCAATATGGTAATAGCTTACAGGTAAATTAA	1851	0.3733	MMEPTETEKTFEVDPKNSKSPNKDNLDSDKIPEGYKRISELTDEDIRGLEFDTEEDAYDFYREYAKFIGFSVRKGDVYRNCNGSITMRQLVCNREGERSEKHLNRTDRLREAKALTRTGCKARLRVSLDYRSRKWRVGIFEPAHNHELTPEIMIHFLPAYRGLSVADKAQVDCIHHYGVRTCHIMGLIMVQKGGYSDLGFCKKDLYSHIDKDNREKIDDGDAFAALCYLQSNRQKFEDEWNKDVDKHGLRENRTTSICEGINSFIKRHNELTSDFKSKYTQPMMTTTLERYEVQASNVYTRNKFFDVQKQIEKVDAINVIERMDVGNCYEHEQVESIPASLILKRWTKLAKVEHISSVYAEEGDTSKKDLLRSGAVGVACNRLNKVARRNPLNFVKNIESIHNLAEQIERQESIDLNIIDISRVVCDPTVVKTKGHTVRTCTKYATRDQLDTVIEEESSVETDEDSRDESRSRDVLISNHLNDVTVSAGQNCASDKGQSKKRRKNSQGLKLTQESVNERRSSDVNKGQQNDTGIAFSGMNTPSLFSNHLYYSNVNGPSISRPVHIRPSMIHGFGQGFVGNRVEDMVQYPQMYMQQSLYTPPVVHNFNQYGNSLQVN	616

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi720g00011	616	MobiDBLite	consensus disorder prediction	1	34	-	-
	Sebi720g00011	616	Pfam	FAR1 DNA-binding domain	59	149	IPR004330	-
	Sebi720g00011	616	PANTHER	OS01G0519700 PROTEIN	44	248	-	-
	Sebi720g00011	616	MobiDBLite	consensus disorder prediction	488	535	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi720g00011	Sebi-Chr720	254823	257768	Dispersed/Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi720g00011		FAR1	3.6e-21	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi720g00011	-		-	ccaj:109792835	237.269