Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi720g00009 ATGAGTAGGTGTTTTGAGAAGCCAATCCCCAGGGATTTTATCAAGGAAATTATTCGTAACAGTTGGAAAGAGTTGACTCTGCGTATTGATGGGGGGCGTTGTTATTTTTGTAAGTTGCTGTGGCGTGAAAGAATTGGGGAGAGTTTCAAAGATTGTCACCTGGGGAATAATTGGTACAAATTTGTGAAAGATATGAGACTGAGAACAGGGGACAAGGTCGTTTTCAAGACCATAATTGCAGGGTTGAATGATCTTAATGTTAGCATAGTACGCAAAGAGAGTTAG 285 0.4035 MSRCFEKPIPRDFIKEIIRNSWKELTLRIDGGRCYFCKLLWRERIGESFKDCHLGNNWYKFVKDMRLRTGDKVVFKTIIAGLNDLNVSIVRKES 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi720g00009 94 Gene3D - 1 94 IPR015300 -
Sebi720g00009 94 Pfam B3 DNA binding domain 8 92 IPR003340 GO:0003677
Sebi720g00009 94 SUPERFAMILY DNA-binding pseudobarrel domain 8 89 IPR015300 -
Sebi720g00009 94 ProSiteProfiles B3 DNA-binding domain profile. 1 93 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi720g00009 Sebi-Chr720 234644 235112 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi720g00009 B3 1.9e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi720g00009 - K23269 lja:Lj4g3v1330190.1 67.3958