Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi720g00001 GGCATCTTCGAGATTTTATCTCTATCTGGCTCATGTACCTACACTGGTGCTGGTGGTGCACTTCGTAAAAGTGGCATGTTGAGTGTTTCACTGGCTAAACCTGATGGAAGGGTTTTTGGAGGTAACATTGAGAGTTCATTGATAGCAGCTGGCCCTATTCAA 162 0.4506 GIFEILSLSGSCTYTGAGGALRKSGMLSVSLAKPDGRVFGGNIESSLIAAGPIQ 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi720g00001 54 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 1 54 IPR039605 GO:0003680
Sebi720g00001 54 SUPERFAMILY AF0104/ALDC/Ptd012-like 1 54 - -
Sebi720g00001 54 Gene3D - 1 54 - -
Sebi720g00001 54 Pfam Plants and Prokaryotes Conserved (PCC) domain 2 54 IPR005175 -
Sebi720g00001 54 ProSiteProfiles PPC domain profile profile. 1 54 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi720g00001 Sebi-Chr720 52916 53077 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi720g00001 1 54 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 55.556 4.31e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi720g00001 - - aip:107632385 87.4261