Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi71g00207 ATGTTCAGTCCGAGCATGGATTCTGCGAGGGACGGGGGTGCTGTTGCAGGGACGGTGCTAATTCCCATGCGGTTTGTGTGGCCATATGGGGGGAGAAGTGTGTATCTCAGTGGTTCTTTTACGCGGTGGTCTGAGCTTCTACAAATGTCGCCAGTCGAAGGTTGCCCAACTGTGTTCCAAGTTATTCATAGCTTGGCCCCTGGTTATCATCAGTATAAGTTTTTTGTTGATGGAGAATGGCGGCATGACGAACATCAGCCTTATATATCTGGAGAATATGGGATAGTTAACACAGTTTTATTGGCTACTGATCCTAACTTCGTACCTGGTTTAACTCCAAACATAGTTTCTGGATCTAACATGGATGTTGATAATGAGGCTTTCCGGCGAATGGTCCGATTGACAGATGGTACATTGAGTGAGGTGTTGCCAAGAATATCAGATGTTGATGTACAGACCTCGCGTCAGCGTATTTCTGCATTCCTGTCTATGCGCACAGCTTATGAATTACTTCCTGAGTCAGGCAAGGTTGTTACCTTGGATATTGATTTGCCAGTGAAACAGGCATTTCACATACTGCATGAGCAGGGAATTCCCATGGCTCCTCTTTGGGACTTCTGCAAGGGGCAGTTTGTTGGAGTACTCAGTGCTTTGGATTTTATTTTAATTTTAAGAGAGCTAGGGAATCATGGGTCCAATTTGACAGAAGAGGAGCTTGAAACACATACCATATCAGCTTGGAAAGAAGGGAAATGGACAGCATTTTCCAGACGTTTTATCCATGCAGGGCCGTATGATAATTTGAAAGATATTGCTGTGAAGATCTTGCAAAATGAATTTTCAACAGTCCTATTATTCATTCATCTTCTGAAGATGGTTCATTTCCACAGCTACTACATCTTGCTTCACTTTCAGGAATCCTTAAATTGCATTGCCTATACTTCAACTTCCAATCTGCACAATTCCTGTGGGCACATGGGTGCCCAAAATTGGGGAGTCAAATCGCCGGCCTCTTGCAATGTTGAGACCAAGTGCTTCACTTACTTCAGCCCTAAACTTATTAGTTCAAGGCTAATGGTACTGGTAGAGAGCACTGTCTCACACTTTGAGAAGAAAGCTCAAGTAAGTTCAATACCGATAGTTGATGATAATGACTCATTGCTTGATATATATTGTCGGAGGCAAGAGAAAGAGGCCTGTAAATTTGAGTTTTTGATTGTCCCAAATTATTCATCTCCCCCCATTCATGTTATCTTCAAATATGATGTGCTCCTGAAATATAGATACGAGCAAAGTGGGATGCACAAAGTCTGTAATCGTTCCATATTGTGA 1332 0.4264 MFSPSMDSARDGGAVAGTVLIPMRFVWPYGGRSVYLSGSFTRWSELLQMSPVEGCPTVFQVIHSLAPGYHQYKFFVDGEWRHDEHQPYISGEYGIVNTVLLATDPNFVPGLTPNIVSGSNMDVDNEAFRRMVRLTDGTLSEVLPRISDVDVQTSRQRISAFLSMRTAYELLPESGKVVTLDIDLPVKQAFHILHEQGIPMAPLWDFCKGQFVGVLSALDFILILRELGNHGSNLTEEELETHTISAWKEGKWTAFSRRFIHAGPYDNLKDIAVKILQNEFSTVLLFIHLLKMVHFHSYYILLHFQESLNCIAYTSTSNLHNSCGHMGAQNWGVKSPASCNVETKCFTYFSPKLISSRLMVLVESTVSHFEKKAQVSSIPIVDDNDSLLDIYCRRQEKEACKFEFLIVPNYSSPPIHVIFKYDVLLKYRYEQSGMHKVCNRSIL 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi71g00207 443 Gene3D Immunoglobulins 21 108 IPR013783 -
Sebi71g00207 443 ProSiteProfiles CBS domain profile. 170 232 IPR000644 -
Sebi71g00207 443 SUPERFAMILY CBS-domain pair 156 283 IPR046342 -
Sebi71g00207 443 CDD E_set_AMPKbeta_like_N 22 100 - -
Sebi71g00207 443 FunFam Sucrose nonfermenting 4-like protein 18 103 - -
Sebi71g00207 443 SUPERFAMILY E set domains 21 102 IPR014756 -
Sebi71g00207 443 Pfam Glycogen recognition site of AMP-activated protein kinase 21 104 IPR032640 -
Sebi71g00207 443 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 152 394 - -
Sebi71g00207 443 Gene3D - 147 306 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi71g00207 Sebi-Chr71 2338485 2347515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi71g00207 11 115 Protein tyrosine phosphatase (PTP) family AT3G01510 30.841 7.88e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi71g00207 - - aprc:113874669 548.51