Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi71g00206 ATGGCCCCTTCTAGGAAATCTAGAAGTGTAAATAAGAAGTTTTCTAATATTCATGAGGCTGCATCTAGTAAAGATAAGGATGCAGCAAATGCTAGCAAGAATAGACAGAAGGCAAGTGCTGGTATTCAGAAGAAGAGAAAATTGACTGACATGTTAGGGCCACAATGGAGTAAGGAAGAGCTTGAGCAATTCTATGAAGCTTACCGTAAATTTGGGAAAGATTGGAAGAAGGTTGCTCTCGCAGTACGTAGTAGATCTATGGAAATGGTAGAAGCCCTGTACACTGTGAACAGGGCATACTTATCTCTTCCAGAAGGCACTGCTTCTGTTGTTGGACTGATAGCAATGATGACAGATCATTATAGTGTACTGGGAGGAAGTGACAGTGGAAAAGAGAGCAATGAAGATGCAGAAATATCTAAAAAGTCTAAAAAACGTTTGCGGGGAAATCATCTAAATGACAATAAAGCATTAGATGGACACATTTCAGATCATTCTCAGTCTCATTCTGTTGCATCAGGTGATGGTTGCCTGTCATTGTTGAAGAAGAGGCATTCTGGAATTAAGCCTCATGCTGTTCGAAAAAGAACTCCCCGTGTCCCTATTTCATATTCTATTGGTAGAGATAACGGGGAGAAGTTTTTTTCACCTGCTAGGCAGGGCTCCAAACAAATGGTTGATACTAATGATGTTGCTCATAAGATTGCATTAGCATTGACAGAGGCTTCACAAAGAGGTGGCTCTTCTAAAATTTCTGGATCACCAAACAAGAAAAATATGCCATCACCTGATCTGAAAAATGAGAAGCGTGTTAAATCAGAAAAGGCAGGGGCCAAGTTTTGCAGTTCTGACATGGACGGGGGTAGTTCTGAGTTGAGTTTAGGAAGCACAGAAGGTAATAATGGAGATTATTCTAAAAAAACAATTCATCAGAGAAGTAGAGAAAATGCTGGAAGAGGAAGGAATCAGGAAAAGGGAGTAAAACACTATGGGAAGAATTTAGAACCTGAGGAAAATTCAAACAAGCATTTGAGTGACATAAAGGAGGCCTCCAGTGGGACAGATGATGGTAAAAATATGAGTTTCATCAAATCCAATTTTAACACAGATTTTGCAGCTGCAAAAAATGCAGGGTCCTCTTATAAGGGTTCCAGGAAAAAAAATAAAAAACTACTGTTTGAGAAAGATGAAGGTTCTGCTTTTGATGCCCTGAAAGCTTTGGCTGATCTGTCTTTGATGATGCCAGTAACAAACCCTGACACTGAGTCATCTGCACAGGTCAAGGAAGGAAACCATGATGTTGTTGATGAATCTAAAATGGAAAGACATAATGTATTTCCTAGGATTGATAGCACCACTTCAAGTAAATTGGGCAAGGTTTATTCTGATAATAATGGAGCTGCTGCTACTGAAGCAGAGGGAGCATACCAGCTTAATGCAGGAATCAGAAAAAGAAAACAAAAATCTTCTACCTTAAAAAATGATGAAACACATACTGCTGCTCATTTAAGTGGTTCCCAGAAAATGAAGGTTACTGATGAGGTGAAAAAGTCCATAGTTAAAGGGAAGCGCTCATCAGTTTGTACAGCACACTCAAGACAACTAAAAGTGGTGAAATCCCTGGGAAATATGTCTTCAAATACTAATGACAAAGGGGAAAGAGATGATTCATCATTTTCCCCCATAAAGGTTTCGTCTACTAACCAAGTCAGTCAAGTTAACAGAGGAAGGCCTAGAAGAAAGATGGAAAAACCAAAACCAATCCGACGAGATCTGACGGTGTCTGGAAATATCTTTAGTGGTCATAATAAATATTCTAGTGTGAAGGGAATGCTTATCAATTGCCTGTCTTCATATCAAATGCGGCGATGGTGCACTTTTGAGTGGTTTTATAGTGCTATTGATTACCCATGGTTTTCAAAGAAAGAGTTTGTAGAGTACTTAGACCATGTTGGATTGGGTCATGTTCCGAGATTGACTCGTATTGAGTGGGGAGTTATTAGAAGTTCTCTTGGTAGACCACGGAGATTTTCAGAGCAATTTTTGATAGAAGAAAAAAATAAACTTAATCAATACCGGGAATCTGTCAGATCACATTATGCTGAAGTTCTTGCTGGTACCAAGGAAGGCCTTCCTACTGATTTGGCCCAACCATTAATTGTTGGGCAGCGTGTGATTGCTATTCATCCAAAGACAAGAGAGATTTATGATGGAAGTATACTGACTGTAGACCATTGTAGGTACAGGGTTCAGTTTGACCAGCCTGAACTTGGGGTTGAATTTGTCACGGATATTGACTGCATGCCTTTGTATCCATCTGAAAATATGCCCACGTCTCTGATAAGAAACAATATCACTCCTGAGAACCTTAATGATCCGATGCTTAATGGGAAACTGAGACAGAGAAAGATTGCTGAGCACACGATATTGTCCCCTAGTGAGAATTTAGATAACCTTAAAGGTCTTTATATATCCCCTACTATGCATGGAAGCAGAACTTTATCAAAACAGGGATTTTCTTCAGGCTGCAAATCGCAAGCAAAAGTTGTGTTCAGTGAGTTTGGTAGTGCCCAACTAGCATCAAGTTCTCAACCTTCCCTTCTTGAACATGTCCACTCAAAAGATGCTGACATATTAGCAATTTCAGAATTGGCTCGTGCTCTAGACAAGAAGGAACTTGTCTTGTCTGAACTGAAGCACATGAATGATGGGGTATCAGAAAGCCAGAAATATGGGGACAACTCAGTGAAGGATTCAGAACCTTTTAAGAGGAATTATGCTTCAGTAATAAAGCAATTAACTGAAGCAAATGAACAGGTGTCTTCTGCCTTGTTTTTCTTGAGGCAACGCAACACATATCAAACATGCTCCTCAGTTTTGTCAATAAAGCCCATGGCTAATTTTGATGATCCTGGTGGTCAGGCTAGCTCTTCCAATTGTTCAGCTTGCCACAACCAAGAATCTATATCTCAAAGTCATATAGCTGAAATTGTTGAAAGTTCTAGAAGAAAAGCCCGAACTATGGTTGTTCAAGCTACTCAGGCAATGTCAGTTTTTAGAAAGACAGAAAGTAAGGTTGAAAGAATTGAAGACGCAATAAATTTTATCAATAACCGGCTTTCAGTTGATGACCCTACTGCTTCAGCCACAAATTTTCTGCCCACAGATTCTATTACTTTGGCTACTCAGGATCAATTGACTGCCAGCACATTAAATCCCTTGGAAAGTTGTCTTGCACAAGATGCTGAACTTAACAATTCATCCAACCAAAATGAAATGAAAATTCCCTCAGAACTCATATCCCATTGTCTAGCCACACTGCTCATGATTCAGTTCAACAAGACCTGA 3348 0.3961 MAPSRKSRSVNKKFSNIHEAASSKDKDAANASKNRQKASAGIQKKRKLTDMLGPQWSKEELEQFYEAYRKFGKDWKKVALAVRSRSMEMVEALYTVNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGKESNEDAEISKKSKKRLRGNHLNDNKALDGHISDHSQSHSVASGDGCLSLLKKRHSGIKPHAVRKRTPRVPISYSIGRDNGEKFFSPARQGSKQMVDTNDVAHKIALALTEASQRGGSSKISGSPNKKNMPSPDLKNEKRVKSEKAGAKFCSSDMDGGSSELSLGSTEGNNGDYSKKTIHQRSRENAGRGRNQEKGVKHYGKNLEPEENSNKHLSDIKEASSGTDDGKNMSFIKSNFNTDFAAAKNAGSSYKGSRKKNKKLLFEKDEGSAFDALKALADLSLMMPVTNPDTESSAQVKEGNHDVVDESKMERHNVFPRIDSTTSSKLGKVYSDNNGAAATEAEGAYQLNAGIRKRKQKSSTLKNDETHTAAHLSGSQKMKVTDEVKKSIVKGKRSSVCTAHSRQLKVVKSLGNMSSNTNDKGERDDSSFSPIKVSSTNQVSQVNRGRPRRKMEKPKPIRRDLTVSGNIFSGHNKYSSVKGMLINCLSSYQMRRWCTFEWFYSAIDYPWFSKKEFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLIEEKNKLNQYRESVRSHYAEVLAGTKEGLPTDLAQPLIVGQRVIAIHPKTREIYDGSILTVDHCRYRVQFDQPELGVEFVTDIDCMPLYPSENMPTSLIRNNITPENLNDPMLNGKLRQRKIAEHTILSPSENLDNLKGLYISPTMHGSRTLSKQGFSSGCKSQAKVVFSEFGSAQLASSSQPSLLEHVHSKDADILAISELARALDKKELVLSELKHMNDGVSESQKYGDNSVKDSEPFKRNYASVIKQLTEANEQVSSALFFLRQRNTYQTCSSVLSIKPMANFDDPGGQASSSNCSACHNQESISQSHIAEIVESSRRKARTMVVQATQAMSVFRKTESKVERIEDAINFINNRLSVDDPTASATNFLPTDSITLATQDQLTASTLNPLESCLAQDAELNNSSNQNEMKIPSELISHCLATLLMIQFNKT 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 1 17 - -
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 242 261 - -
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 125 170 - -
Sebi71g00206 1115 Coils Coil 1019 1039 - -
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 18 32 - -
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 539 585 - -
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 559 575 - -
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 262 279 - -
Sebi71g00206 1115 Gene3D - 2 108 - -
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 1 46 - -
Sebi71g00206 1115 CDD SANT 56 90 IPR001005 -
Sebi71g00206 1115 ProSiteProfiles SANT domain profile. 51 88 IPR017884 -
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 240 355 - -
Sebi71g00206 1115 SMART sant 52 100 IPR001005 -
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 483 512 - -
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 305 353 - -
Sebi71g00206 1115 PANTHER LIN-9 1 1111 IPR010561 GO:0006351|GO:0017053
Sebi71g00206 1115 Pfam Myb-like DNA-binding domain 55 90 IPR001005 -
Sebi71g00206 1115 SUPERFAMILY Homeodomain-like 52 98 IPR009057 -
Sebi71g00206 1115 MobiDBLite consensus disorder prediction 286 304 - -
Sebi71g00206 1115 Pfam DIRP 629 730 IPR033471 -
Sebi71g00206 1115 SMART DIRP_2 630 731 IPR033471 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi71g00206 Sebi-Chr71 2321156 2334719 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi71g00206 DIRP 8.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi71g00206 - - gmx:100781646 1766.51