Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi71g00191 ATGGGGTGTGTGTTTGGGAAAGAGGCTTCAGAGAGAAGGAAGGAAGAGAGGGAAGAGGAAGTGGAAGTTTCAAAGGCAGAGGAGGTTCAAAATGGTGATAATAATGCAAAGGAGGGTGAAGAGAAGGAGAAGAGCAAAAGGCCTAAGAGGGAAAAGAGAAGATCTTCAAAGCCAAATCCAAGGTTGAGCAATCCACCAAACCATGTGCATGGTGAGCAAGTGGCTGCAGGGTGGCCCTCTTGGCTCTCTAAGGTTGCTGGGGAAGCCATAAATGGATTGACCCCTAGAAGGGCAGACACTTTTGAGAAGCTTGATAAGATTGGACAAGGTACATATAGCAATGTTTACAAGGCTAAGGATACTTTAACTGGAAAAATTGTTGCCCTAAAGAAGGTTAAATGTTACATGCATCAGCTACTTTCTGGACTGGAACACTGTCACAACCGCCATGTGCTGCATCGTGATATAAAGGGGTCAAACCTTCTTGTTGACAATGAAGGAATTCTTAGGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTAATCACAAGCACCCTATGACTAGTAGGGTAGTTACTTTGTGGTATCGAGCTCCAGAGCTTCTTCTTGGATCCACTGATTATGGTGTAGGAGTGGACCTCTGGAGTGCTGGTTGTATTCTTGCTGAATTATTGGCTGGAAAGCCTATTATGCCTGGTCGAACAGAGGTGGAGCAACTACATAAGATATTTAAGCTATGTGGTTCTCCTTCTGAAGAATATTGGAAAAAGTCAAAGTTGCCACACGCTACCATTTTTAAGCCCCAACAATCATACAAGCGGTGCATAGTAGAGACATTCAAAGATTTCCCACCATCATCCCTGCCACTAATTGAGACCCTTCTTGCAATCGATCCAGCTGAACGTCAAACTGCCACTGCTGCACTGCATAGTGAATTCTTTACAACACAACCTTATGCTTGTGAACCCTCTAGCCTTCCAAAATATCCTCCCAGCAAAGAGATGGATACAAAGCTACGGGATGAAGAAGCTAGAAGACTGAGAGCTGCTGGCAAAGCTAATGCTAATGGTGTCAAGAAATCTCGTCCACGTGAGCGAGGTGGGAGGAGAATTCCAGTTCCGGATGTCAATGCTGAGCTCCAAGCAAATATTGATAGATGGAGACTGGTAACACATGCAAATGCTAAGAGCAAGAGTGAGAAGTTTCCTCCTCCCCACCAAGATGGAACTCTAGGCTATCCTTTGGGTTCTTCACATCACATGGATCCACTTTTTGATCCTCCTGATGTTCCATTTAGTTCAATAAACCTCTCATATCCTAAAACAAATATCCAGACCTGGTCTGGCCCATTGGTGGAACCTACTGTGAGTGCACTGAGGAGAAAGAAGAACAAGGTAGTTGATGGGCACATACAACCCAAGTCATCAAACAAAGAAGGACTCAAATAG 1452 0.4428 MGCVFGKEASERRKEEREEEVEVSKAEEVQNGDNNAKEGEEKEKSKRPKREKRRSSKPNPRLSNPPNHVHGEQVAAGWPSWLSKVAGEAINGLTPRRADTFEKLDKIGQGTYSNVYKAKDTLTGKIVALKKVKCYMHQLLSGLEHCHNRHVLHRDIKGSNLLVDNEGILRIADFGLASFFDPNHKHPMTSRVVTLWYRAPELLLGSTDYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIVETFKDFPPSSLPLIETLLAIDPAERQTATAALHSEFFTTQPYACEPSSLPKYPPSKEMDTKLRDEEARRLRAAGKANANGVKKSRPRERGGRRIPVPDVNAELQANIDRWRLVTHANAKSKSEKFPPPHQDGTLGYPLGSSHHMDPLFDPPDVPFSSINLSYPKTNIQTWSGPLVEPTVSALRRKKNKVVDGHIQPKSSNKEGLK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi71g00191 483 SUPERFAMILY Protein kinase-like (PK-like) 96 320 IPR011009 -
Sebi71g00191 483 ProSiteProfiles Protein kinase domain profile. 1 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi71g00191 483 MobiDBLite consensus disorder prediction 460 483 - -
Sebi71g00191 483 Coils Coil 7 27 - -
Sebi71g00191 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Sebi71g00191 483 MobiDBLite consensus disorder prediction 352 372 - -
Sebi71g00191 483 MobiDBLite consensus disorder prediction 7 47 - -
Sebi71g00191 483 Pfam Protein kinase domain 132 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi71g00191 483 FunFam probable serine/threonine-protein kinase At1g54610 120 355 - -
Sebi71g00191 483 ProSitePatterns Protein kinases ATP-binding region signature. 107 130 IPR017441 GO:0005524
Sebi71g00191 483 SMART serkin_6 101 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi71g00191 483 MobiDBLite consensus disorder prediction 1 72 - -
Sebi71g00191 483 Gene3D Transferase(Phosphotransferase) domain 1 133 337 - -
Sebi71g00191 483 Gene3D Transferase(Phosphotransferase) domain 1 88 132 - -
Sebi71g00191 483 PANTHER CELL DIVISION PROTEIN KINASE 99 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi71g00191 Sebi-Chr71 2118480 2122358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi71g00191 124 353 Core Cell Cycle Gene Families AT5G10270 52.381 2.44e-78 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sebi71g00191 Pkinase 2.6e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi71g00191 K08819 - gmx:100791757 639.032