Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi71g00190 ATGGCTTTATACGAGAAACTAACGACTGTGATGACCTCTGATCACGCATCAGTGGTGTCAATGAACCTGTTCGTTGCTCTTCTCTGCACTTGCATCATCATTGGTCATTTGTTGGAGGAGAATCGCTGGATTAATGAATCCATCACTGCCCTTCTCATTGGTCTCTGTACTGGGGTTTTCATATTGCTTACCACTGGTGGAAAAAGCTCTCATATATTGCTTTTCAGTGAAGATCTTTTCTTTATTTACCTTCTTCCTCCCATCATTTTCAATGCCGGGTTTCAGGTCAAGAAGAAACAATTTTTCCGCAATTTTATGACTATCATGCTCTTTGGTGCAATTGGTACATTGATATCATTCTGCATCATATCACTAGGTGCCATCCACTTTTTCCAGATACTAGATATTGGTTCCCTCAAGATTGGAGATTATCTAGCAATTGGAGCAATATTTTCAGCAACAGATTCTGTTTGCACATTGCAGGTTCTTAATCAGGATGAGACACCTTTACTATACAGCCTGGTGTTTGGGGAAGGGGTAGTAAATGATGCTACCTCCGTAGTACTCTTCAAAGCAATTCAGAATTTTGACCTCTCCCACATCGACTTAATCACTGCTTTGCAGTTAGTAGGAAATTTTTTATATTTATTCATCGCAAGCACTGTGCTGGGAATCTTAGCTGGATTGCTTAGCGCATTCATTATTAAAAAGCTCTATTTTGGCAAGTTGATAAGGCATTCTACAGACCGTGAGGTTGCTCTCATGATACTCATGGCTTACCTTTCATACATGCTAGCTGAACTATTTTCATTAAGTGCCATTCTTACTGTGTTCTTCAGTGGCATTGTTATGTCTCACTACACGTGGCATAATGTGACTGAAAGTTCAAGAGTGACAACCAAGCATGCTTTTGCCACTTTGTCATTCATTGCTGAGATCTTTATCTTCCTTTATGTTGGGATGGATGCACTAGATATAGAGAAGTGGCGATTTGTAAGTCAAAGCCCAAGAAAATCGATTGGGGTCAGTTCGTTGTTGTTGGCACTTATCCTAGTAGGAAGAGCTGCATTTGTTTTCCCTCTGTCATTCTTATCCAACTTGTCCAAGAAGTCTCAATCTGAGAAAATTGAGTTCAAGCAACAAGTAACAATTTGGTGGGCTGGTCTCATGCGTGGAGCTGTTTCAATAGCACTTGCTTACAATCAGTTTACCAGGCTTGGCCACACCAAATTGCGTGAGAATGCCATCATGATCACTAGCACCATAACTGTTGTACTCTTCAGCACAGTGGTGTTTGGGTTAATGACGAAGCCACTTGTGAGGTTATTGCTTCCTTCCTCCAAACAAATAATCAGCATACCGTCCCCACCATTGACCCCTAAATCATTCACTGTGCCACTTCTTGGCAATGGACAAGATTCAGGGGTCAATGGTGGCACCCAAAATGGGCTTCGATCAAGCAGATTGCGTATGCTTCTAAGCATTCCTGCTCGTGGGGTACACCATTATTGGCGCAAATTTGATGATTCAGTCATGCGACCTATCTTTGGTGGCCGGGGTTTTGTACCTTACGTTCCTGGTTCACCCCTTGAACAAAGTGTTCATCAGTGGCATTAA 1617 0.4193 MALYEKLTTVMTSDHASVVSMNLFVALLCTCIIIGHLLEENRWINESITALLIGLCTGVFILLTTGGKSSHILLFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAIGTLISFCIISLGAIHFFQILDIGSLKIGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSHIDLITALQLVGNFLYLFIASTVLGILAGLLSAFIIKKLYFGKLIRHSTDREVALMILMAYLSYMLAELFSLSAILTVFFSGIVMSHYTWHNVTESSRVTTKHAFATLSFIAEIFIFLYVGMDALDIEKWRFVSQSPRKSIGVSSLLLALILVGRAAFVFPLSFLSNLSKKSQSEKIEFKQQVTIWWAGLMRGAVSIALAYNQFTRLGHTKLRENAIMITSTITVVLFSTVVFGLMTKPLVRLLLPSSKQIISIPSPPLTPKSFTVPLLGNGQDSGVNGGTQNGLRSSRLRMLLSIPARGVHHYWRKFDDSVMRPIFGGRGFVPYVPGSPLEQSVHQWH 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi71g00190 538 Gene3D - 140 192 - -
Sebi71g00190 538 PANTHER SODIUM/HYDROGEN EXCHANGER 12 516 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Sebi71g00190 538 PRINTS Na+/H+ exchanger signature 79 90 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi71g00190 538 PRINTS Na+/H+ exchanger signature 148 158 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi71g00190 538 PRINTS Na+/H+ exchanger signature 108 116 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi71g00190 538 PRINTS Na+/H+ exchanger signature 93 107 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Sebi71g00190 538 Pfam Sodium/hydrogen exchanger family 25 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi71g00190 Sebi-Chr71 2106921 2110114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi71g00190 2 536 Antiporters AT3G05030 73.889 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi71g00190 - - ccaj:109808409 965.681