LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi71g00098	ATGGGCCCAGTTGATAAGGCTAGAAAGGAGAAGGACTTTGCCACACTGGAGCTAGCCAACTCAATTACTAGTCTACCAACCCCAACCTTCAGAGAATCAAAGCCAAATCACAGTTTGACAAACACCAATAAATTTGCCACTAATCCTGCTACTAACACCCCACGTACACTCTCCTCCTGCAAAGGAAAAATGGAAAGGTCTTTTCCTTTGATTCTATTTCTCTTTGTCATGTCAATGCCTCTTTCATTTGGGATAAAACAAAACCAACTTCATTACAACTACTACACGTTTTCATGTCCAAATTTGGAAAGTGTAATCAAAAGTGAATTGCTAAGCTTATTCTTGAGAGATGCTACTGCACCAGCAGCATTTCTCAGGCTCATGTTTCATGACTGCCAAGTTCAGGGATGTGATGCCTCCATTTTGTTGGACTCCAATGGTAGCTCTGAAATGATTTCTTCAAGAAACTTTGCCATCAGATACAGGGAAATAATCAGCCACATAAAATCAATATTAGAAGAAGAATGTCCAGGAAAAGTGTCATGTGCAGATATCATTGTATTAGCTGCTAAGGAAGCAGTGTCATTCTCTGGAGGACCCCTTATTCAGATACCACTTGGAAGAAAAGATTCCAAAACTTGCAGTTTCAAGGAGGCTGATGCTAAGCTTCCTTCACCCACAATAACGGTTGATGAATTTATATCCATTTTCATGTCTAAAGGAATGAGCATTGAAGAATCCGTTTCCATTCTAGGGGCACATACACTAGGTGTTGGACACTGCTTAAACATTGTTGGCAGATTGTATGATCAAAGGATAGGGGATGAGATGGATTTGAATTTTGAAGCCTCACTAAGACTAGCATGCCCAACTGAGATTCCTCTAACAAACCTCACATTTGTGCCTAATGACATGACCCCCATTATATTTGACAACCACTATTACCGAGACATCATAATGGGGAGAGGTTTGTTTGGTATTGACTCAAACATTTCTAGAGATCCCCGAACTGCACCTTTTGTCATGAGGTTTGCTTTGGATCAGAATTACTTCTTCGAGGCTTTCTCATCTGCATTTCTTAAGCTTTCTACTACCAATGTTCTCACAAATGAGCAGGGTGATGTTCGAAGGCAATGCAACCAGTTAAACTAA	1152	0.4036	MGPVDKARKEKDFATLELANSITSLPTPTFRESKPNHSLTNTNKFATNPATNTPRTLSSCKGKMERSFPLILFLFVMSMPLSFGIKQNQLHYNYYTFSCPNLESVIKSELLSLFLRDATAPAAFLRLMFHDCQVQGCDASILLDSNGSSEMISSRNFAIRYREIISHIKSILEEECPGKVSCADIIVLAAKEAVSFSGGPLIQIPLGRKDSKTCSFKEADAKLPSPTITVDEFISIFMSKGMSIEESVSILGAHTLGVGHCLNIVGRLYDQRIGDEMDLNFEASLRLACPTEIPLTNLTFVPNDMTPIIFDNHYYRDIIMGRGLFGIDSNISRDPRTAPFVMRFALDQNYFFEAFSSAFLKLSTTNVLTNEQGDVRRQCNQLN	383

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi71g00098	383	Gene3D	-	93	383	-	-
	Sebi71g00098	383	PRINTS	Plant peroxidase signature	301	316	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Sebi71g00098	383	PRINTS	Plant peroxidase signature	99	118	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Sebi71g00098	383	PRINTS	Plant peroxidase signature	245	257	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Sebi71g00098	383	PRINTS	Plant peroxidase signature	123	143	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Sebi71g00098	383	PRINTS	Plant peroxidase signature	179	189	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Sebi71g00098	383	PRINTS	Plant peroxidase signature	160	173	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Sebi71g00098	383	PRINTS	Plant peroxidase signature	357	370	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Sebi71g00098	383	PRINTS	Plant peroxidase signature	317	334	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Sebi71g00098	383	PRINTS	Plant peroxidase signature	198	213	IPR000823	GO:0004601\|GO:0006979\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi71g00098	Sebi-Chr71	1052980	1054987	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi71g00098	132	383	Peroxidase	AT3G17070	51.923	1.85e-84	256

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi71g00098	K00430		-	gmx:100806951	541.576

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