Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi71g00096 ATGGAGGTTGTAGTTTCAAGACAAGAACAATCAAATCAACATGCTGAGGATAAGCTGCAGTTCTCCAGATGCTCAAAAGCTTTTGGAACTTCAAAGAGAAAGGCTGAGGAAATTAATGAGTATGATGGTAATAAGAAACCAGAACCAGAAGAGGAAGAAGAAACTATGGAATGTTTAAAGAAGATCACTCCAGTAGGAATGGAGGCTACAGTTGCACAACGAGGACAGTCAAATCAGCATACTAACAATAATCCAGACAAAGTCTCAAAATGCTCAAAAGCTTTTGAAATTTCAAAAAGGAAAAAGGTCCAAGGAATTCATAAACATACAAAACCAAATTCAGAAATGAAACAAGACCTTCTGCTATGTTCGAAGAGAACCCCCAAACTTCCATCTAGGAAAGGAGAAGAGCCAAAGAAGCTTACTGCCTCAAACAAGAAAAGGAAATTTGAAGATGATCCCATGATTGACAATTTTGAAGAAGATGAAGAAACACTTTTTCTTTTAAAGGCAAAGACCAGGAGCAGAGCTAGCAGAATGGATAACGTGATGGGTGTTCAACAAAATCCTCGGATGTGTCATCAGTGCTTGAAAAAGGAGAGAACAGCTTTTGTGCCTTGTACTAAATGTCCAAAAATGTACTGTTTGCGATGCATCAATCAATGGTACCCAGATATGTTGATAGAAGAAATTGCTCAAAGCTGCCCATTTTGCCGTAAAAATTGCAATTGCAATGTTTGCTTGCATTCAAGAGGATTGATTAAGACATCTAACTGGGACATCACCAATTATGAAAAAGCTCAGTATCTGCAATATATGATTAATTTACTCCTTCCATATCTGAAACAAATTTGTCATGAACAAAGTCAAGAGGAAGAGATTGAAGTTAAAATACAAGGAAAATCTCCTTGTGAGATTGAGATACCGCAAAGTCTTTGTGTTGACAATGAACGTGTCTATTGTGACCATTGTGCTACTTCAATTATTGACCTTCATCGAAGCTGCCCCAAGTGTTCCTATGAACTCTGCCTTAGTTGTTGCCAAGAAATACGCAATGGAAGCATTACACCCCGGGATGAGATGAAGTTCCAATATGTGAATAGGGGTTATGATTATATGCATGGCGGTGACCCGCTCCCAATGTCTTATGATTTGGAGACATCAGATGGTCATATTGAGCTATCCACTGAGTGGAATGCCAAGAATGATGGAAGTGTTAGTTGTGGTCCAGAGAAGATGGGGGGTTGTGGTGGCTCTGTACTGGAGCTGAGGCGCATCCTGCCACGTGGGTGGATATCTGACTTGGAAGCCAAAGCTCGCAATATGCTGAAAATTTATGAAATGGAACATAGAACTCTTCAGCAGAAAGAAGTGGTATCAAGCTACAGCACTATGAAAAATGCAGCGTTTGGAGAAGCCACAAATGACAATAACATATACTGTCCAGACTTAAAAGAGGGGCTGTTGCTTTTCCAAAAGCACTGGACTAATGGTGAACCAATTATAGTTCGTGATGTTCTTGAACAGGGAACAGAGGGAAGAACATACAGAAATCTCTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCCCCATCTGATAAATTTGAAGATCTTCTGCCCCGCCACTGTGATGAGTTTATTCGCTCCTTGCCATTCCAAGAGTATACTGATCCTCGGGGTGGAATTCTTAATCTCGCAGTAAAGTTGCCAGCCCATGTCCTTAAACCTGATATGGGTCCAAAAACATATATTGCTTATGGGATTAAAGAAGAACTTGGTAGAGGAGACTCTGTAACAAAGCTTCACTGTGACATGTCTGATGCGGTGAATATTTTGACCCATACAGCTGAGGTGATGTTAACTGATGAGCAGCACTCGATTATTCCAAAGTTGAAAGAAGCGCACAAGGCACAAGATGAGAGAGAACTCTGCCCTCAAGAGAGGGTTGCTGAATGGCTGAATGGTCGACCTTGCAAAGACAACATAGAAAAGATAGAGAATAAGGAAGTCTTAGAACCCAATGATATGGAGAAGCGCCCTATTGAAATTAATGGAAAGATCTTTCGAAATAGTGTGTCCGAAGGGGCTACTTTTCCTGCTATTTCTACAGAAAATGAATCAATGGAAACAGGTTGTGCCCTATGGGATATATTTCGGAGAGAGGATACTGAAAAATTAGAGACATATCTAAGAACGCACTCAAAAGAATTTAGACATACTTACTGTTCTCCAGTTGAACAGGTTGTGCATCCAATTCATGACCAATGTTTTTATTTGACTTCTGAGCACAAGAGGAAGCTGAAGGAGGAATTTGGTGTAGAACCCTGGACTTTTGAGCAGAAACTTGGGGAGGCAGTAGTTATTCCTGCCGGATGCCCACATCAAGTCAGAAATCTCAAGTCATGCACAAAAGTTGCTGTAGACTTCGTGTCCCCAGAAAATGTCCATGAGTGTCTGCGTTTAACTAATGAGTTCCGTCAGCTCCCCAGGAACCACAAGGCTAGAGAAGATAAACTAGAGATAAAGAAGATGATAGTTTATGCCATCGATCAAGCTGTCAAAGACTTAAAAGCTTTATTTGAGTGCTCTTGA 2592 0.4074 MEVVVSRQEQSNQHAEDKLQFSRCSKAFGTSKRKAEEINEYDGNKKPEPEEEEETMECLKKITPVGMEATVAQRGQSNQHTNNNPDKVSKCSKAFEISKRKKVQGIHKHTKPNSEMKQDLLLCSKRTPKLPSRKGEEPKKLTASNKKRKFEDDPMIDNFEEDEETLFLLKAKTRSRASRMDNVMGVQQNPRMCHQCLKKERTAFVPCTKCPKMYCLRCINQWYPDMLIEEIAQSCPFCRKNCNCNVCLHSRGLIKTSNWDITNYEKAQYLQYMINLLLPYLKQICHEQSQEEEIEVKIQGKSPCEIEIPQSLCVDNERVYCDHCATSIIDLHRSCPKCSYELCLSCCQEIRNGSITPRDEMKFQYVNRGYDYMHGGDPLPMSYDLETSDGHIELSTEWNAKNDGSVSCGPEKMGGCGGSVLELRRILPRGWISDLEAKARNMLKIYEMEHRTLQQKEVVSSYSTMKNAAFGEATNDNNIYCPDLKEGLLLFQKHWTNGEPIIVRDVLEQGTEGRTYRNLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYTDPRGGILNLAVKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILTHTAEVMLTDEQHSIIPKLKEAHKAQDERELCPQERVAEWLNGRPCKDNIEKIENKEVLEPNDMEKRPIEINGKIFRNSVSEGATFPAISTENESMETGCALWDIFRREDTEKLETYLRTHSKEFRHTYCSPVEQVVHPIHDQCFYLTSEHKRKLKEEFGVEPWTFEQKLGEAVVIPAGCPHQVRNLKSCTKVAVDFVSPENVHECLRLTNEFRQLPRNHKAREDKLEIKKMIVYAIDQAVKDLKALFECS 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi71g00096 863 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 511 859 IPR045109 GO:0032454|GO:0033169
Sebi71g00096 863 MobiDBLite consensus disorder prediction 30 54 - -
Sebi71g00096 863 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 189 258 IPR018866 -
Sebi71g00096 863 Pfam JmjC domain, hydroxylase 706 809 IPR003347 -
Sebi71g00096 863 MobiDBLite consensus disorder prediction 129 147 - -
Sebi71g00096 863 MobiDBLite consensus disorder prediction 126 147 - -
Sebi71g00096 863 ProSiteProfiles Zinc finger RING-type profile. 193 239 IPR001841 -
Sebi71g00096 863 FunFam Transcription factor jumonji (JmjC) domain-containing protein 653 835 - -
Sebi71g00096 863 Gene3D Cupin 507 835 - -
Sebi71g00096 863 ProSiteProfiles JmjC domain profile. 558 826 IPR003347 -
Sebi71g00096 863 SMART cupin_9 539 826 IPR003347 -
Sebi71g00096 863 SUPERFAMILY Clavaminate synthase-like 490 857 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi71g00096 Sebi-Chr71 1032963 1037777 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Sebi71g00096 JmjC 8.8e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi71g00096 K15601 K21989 gmx:100797860 1268.83