Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi71g00095 ATGAGGGGGCTTACAGAAAACACTACAATGCCTAAAGGAGTTGAGGGGAGGGAAGAAGAAGTCGATGCAGCAGAGGTAATTAAATTGAACGAGACAAAGGGGTATTGGCTGATGAACTATCATCGTGTGATACCGGTGGAGTCGAAGAAAGAGGGCCTGGCGCCGTCATTGAGGGCAATGAGGACATGGCTCTGGATGGTGCACGAAACATCAAGCTTGACTGAGTGTGGTTTTGGGACTTGGCTTGTTGCGACGGTGGGCATTTGGACACTGAACATGGCGGTGCGACAAAGGCGGTGGGCTGCAACTATGCTTTTCCCTTCTCGCCCACGCTTCTCTTCTCTTCTCTTGCATTGCATTGCATGTGCCTACCCTGCCTCATCGGAGAAGCATCCCATTCCCGACCTCACAATGGCTCACACCCGCTTTGCTTTTTCTCTCCTTTTCTCTTTCATCTTTGCTGCTCTCGCCAATACTGACCCTTCTGATGTTCAAGCACTTGAGGTCATGTACAACTCGTTGAATAGTCCATCTCACCTAACGGGTTGGAAAATCGGTGGTGGTGATCCATGTGGAGAGTCATGGAACGGGGTGACATGTGAGAGTTCAGCCGTTGTTTCCATTGAGCTATCCGGTTTAGGACTCAATGGTACATTGGGGTACCTACTTTCAGACTTTATGTCACTGAAAAAGCTTGACTTGAGTGACAACAATATCCATGACGCAATTCCCTACCAGTTGCCGCCAAATCTTGCAAGCTTGAATCTAGCAAGCAATAACTTAAGTGGAAATCTTCCTTATTCCATTTCAACAATGGTTTCCCTTAATTATCTGAATGTTAGCCACAATGCACTTTCCCTGTCAATTGGAGACATTTTTCCTAATCATTCTGATCTTGGGATCCTGGATCTATCATTCAATAACTTCTCTGGGGATCTTCCTGGTTCACTTGGTGCATTGTCTAATCTTTCTTCTCTCTTCTTGCAGAACAATCAGTTGACTGGCTCTCTTAATAATCTTGTCGGTTTGCCTTTGGATACTTTAAATGTTGCAAACAATCATTTCAATGGATGGATACCTCATGAGCTTAATTCAGTCCATAATTTTATATATGGTGGAAATTCTTTTAACAACAGCCCTGCTCCTCCTTCACCACCATTTACAGCGCCTGCACCTGGAAGATCTGATGACAATAATATTAATAATCACGGTTCTTCATCCAGTTCACATAATAAAATCCTTGGTTCTGATCATGAAAGTTCCGAGGGCCATAAGGGTTTGACAGCTGGAGTCATTGTTGGAATTATTTTAGGTTTAGTGTTTGTTGCTGTCATTGTGCTACTTGCTCTTGTTTTCTGTATCCAAAAGCAAAAAATGAAGGAGAAAGGTCCAAGAACATTTAGTGGGAGTCTTCCTCTTGGAATTGTTAATGAGACTCCTCAGATGCAAGAACAAAGGGTAAAAAGTGCTGTTGTTATTACAGATCTGAAGCCTCCTCCTGCAGACAAAGTGATGGTTGAGAGAATACCTGCAAAAGATGGATCTGTAAAGCAAATGAAGCCCCCTATAACTGCTACATCATACACAGTTTCTGCTCTCCAAAGTTCAACAAATAGCTTTAGTCAAGAATTTCTTGTTGGTGAAGGTTCTCTTGGTCGAGTTTACAAGGCTGATTTCCCAAATGGGATGATCATGGCCATCAAGAAGATAGACAACACGACACTATCATTACAGGAGGAAGACAATTTTCTTGAAGCTGTTTCAAATATCTCACACTTGAGACACCCAAACATTGTTGTGCTAACAGGATATTGTGCAGAGCATGGGCAACGTCTTCTAGTTTATGAGTATGTAGGAAATGGAAATCTGCATGACATGCTCCATTTTGCTGAAGATAGCAGTAAGGCTTTATCTTGGAATGCCCGTGTACGCATAGCACTTGGCACAGCTCGAGCTTTAGAGTACTTGCATGAAGTGTGCTTGCCTTCTGTTGTACATAGAAATTTCAAATCAGCAAATATATTACTTGATGAGGAGCTCGAGCCTCACCTGTCAGACTGTGGTTTGGCTGCTCTAACCTCAAAAACTGAGCGACAGGTTTCAACTCAAATGGTCGGTTCATTTGGTTATAGTGCTCCAGAGTTTGCATTATCCGGAATTTACACTGTAAAAAGTGATGTTTACAGCTTTGGAGTGGTTATGTTGGAGCTATTGACTGGTCGTAAGCCGCTTGACAGTTCACGGGTTAGATCAGAGCAGTCACTTGTAAGGTGGGCTACTCCCCAGCTCCATGATATAGATGCCTTGGCCAAAATGGTTGATCCTGCTTTGAATGGCATGTATCCTGCAAAGTCACTGTCACGCATTGCTGATATCATTGCCCTCTGTGTTCAGCCTGAACCTGAATTTCGACCTCCCATGTCTGAGGTGGTGCAAGCATTGATACGGTTAGTGCAAAGAGCAAATGTGGTTAAACGGCGTCCCAGTGATGAATCTAGTTTCGGTCACAGAACCCCAGATTATGAGGCCACAGACATGTTATATTAG 2547 0.4362 MRGLTENTTMPKGVEGREEEVDAAEVIKLNETKGYWLMNYHRVIPVESKKEGLAPSLRAMRTWLWMVHETSSLTECGFGTWLVATVGIWTLNMAVRQRRWAATMLFPSRPRFSSLLLHCIACAYPASSEKHPIPDLTMAHTRFAFSLLFSFIFAALANTDPSDVQALEVMYNSLNSPSHLTGWKIGGGDPCGESWNGVTCESSAVVSIELSGLGLNGTLGYLLSDFMSLKKLDLSDNNIHDAIPYQLPPNLASLNLASNNLSGNLPYSISTMVSLNYLNVSHNALSLSIGDIFPNHSDLGILDLSFNNFSGDLPGSLGALSNLSSLFLQNNQLTGSLNNLVGLPLDTLNVANNHFNGWIPHELNSVHNFIYGGNSFNNSPAPPSPPFTAPAPGRSDDNNINNHGSSSSSHNKILGSDHESSEGHKGLTAGVIVGIILGLVFVAVIVLLALVFCIQKQKMKEKGPRTFSGSLPLGIVNETPQMQEQRVKSAVVITDLKPPPADKVMVERIPAKDGSVKQMKPPITATSYTVSALQSSTNSFSQEFLVGEGSLGRVYKADFPNGMIMAIKKIDNTTLSLQEEDNFLEAVSNISHLRHPNIVVLTGYCAEHGQRLLVYEYVGNGNLHDMLHFAEDSSKALSWNARVRIALGTARALEYLHEVCLPSVVHRNFKSANILLDEELEPHLSDCGLAALTSKTERQVSTQMVGSFGYSAPEFALSGIYTVKSDVYSFGVVMLELLTGRKPLDSSRVRSEQSLVRWATPQLHDIDALAKMVDPALNGMYPAKSLSRIADIIALCVQPEPEFRPPMSEVVQALIRLVQRANVVKRRPSDESSFGHRTPDYEATDMLY 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi71g00095 848 MobiDBLite consensus disorder prediction 394 414 - -
Sebi71g00095 848 Pfam Leucine rich repeat N-terminal domain 161 200 IPR013210 -
Sebi71g00095 848 CDD STKc_IRAK 546 817 - -
Sebi71g00095 848 Gene3D Ribonuclease Inhibitor 160 429 IPR032675 -
Sebi71g00095 848 Pfam Leucine rich repeat 228 285 IPR001611 GO:0005515
Sebi71g00095 848 SUPERFAMILY L domain-like 159 368 - -
Sebi71g00095 848 ProSiteProfiles Protein kinase domain profile. 540 817 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi71g00095 848 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 618 828 - -
Sebi71g00095 848 MobiDBLite consensus disorder prediction 828 848 - -
Sebi71g00095 848 Gene3D Phosphorylase Kinase; domain 1 504 617 - -
Sebi71g00095 848 ProSiteProfiles Leucine-rich repeat profile. 322 344 IPR001611 GO:0005515
Sebi71g00095 848 ProSiteProfiles Leucine-rich repeat profile. 228 249 IPR001611 GO:0005515
Sebi71g00095 848 Gene3D Transferase(Phosphotransferase) domain 1 618 827 - -
Sebi71g00095 848 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 148 817 IPR046959 -
Sebi71g00095 848 Pfam Protein tyrosine and serine/threonine kinase 546 814 IPR001245 GO:0004672|GO:0006468
Sebi71g00095 848 MobiDBLite consensus disorder prediction 380 420 - -
Sebi71g00095 848 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 160 387 - -
Sebi71g00095 848 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 506 617 - -
Sebi71g00095 848 SUPERFAMILY Protein kinase-like (PK-like) 519 814 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi71g00095 Sebi-Chr71 1001655 1009090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi71g00095 272 848 Strubbelig Receptor Gene Family AT4G22130 68.512 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sebi71g00095 PK_Tyr_Ser-Thr 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi71g00095 - - gmx:100781455 1063.14