Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi71g00089 ATGAGAGCCTCACAGCATCAGCCCCAACAGAGAGGATGCAGGGCATTGTGTTGCAGTTGCAGGTTTAGTGTTTCATCCTCAGAGGAAGCAGAGAGCTCTGCCTCTGATAGGTTCCCTTCAGTTTCTAGCTTAGCACATGCCATGGTGCAAGAGAGACTTGACCAAATGATAAGAGAAAAGACGGAAGCTAGACATGTTGTAGAGAGAAGAAGGCAACAAAGCAGAGACAGAGAAGGAACCAAGTTCGTTGTAATGGTTGCAATGGAGAAGTGCTCTTATGATCCGAGAGAGGATTTTAAGGAGTCCATGATGGAGATGATAACTGCAAACCGCCTTCAAGAAGCGAAAGATCTTCGTAATCTATTGAACTATTATATCTCCATGAACTCCAACAAGTACCATAGTCTTATACTTGAGGTTTTTCATGAGGTTTGTACTAATTTGTTCTTATCATCATGTCAATGCCAACAATGGTGA 477 0.4277 MRASQHQPQQRGCRALCCSCRFSVSSSEEAESSASDRFPSVSSLAHAMVQERLDQMIREKTEARHVVERRRQQSRDREGTKFVVMVAMEKCSYDPREDFKESMMEMITANRLQEAKDLRNLLNYYISMNSNKYHSLILEVFHEVCTNLFLSSCQCQQW 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi71g00089 158 ProSiteProfiles OVATE domain profile. 88 147 IPR006458 -
Sebi71g00089 158 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 28 150 IPR038933 GO:0045892
Sebi71g00089 158 Pfam Transcriptional repressor, ovate 92 149 IPR006458 -
Sebi71g00089 158 NCBIfam uncharacterized plant-specific domain TIGR01568 86 149 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi71g00089 Sebi-Chr71 922468 922944 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Sebi71g00089 Ovate 1.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi71g00089 - - gmx:102663136 242.662