Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi71g00086 ATGAAGCTAGAAAACTCCTCCAACTCCAACGGCCAGATGTCCTTAGCCGGTGACGTTTCGCCGCCGCATCATAACGCTGACGATGCGGAGGAGATATTTGTGCCGCCGCTGAATTTCGCGATGGTTGACAATGGCATTTTTAGGTCAGGCTTTCCCGATGCTGCCAACTTCGGATTCTTGAAATCCCTTCGTCTCCGTTCTGTAATATGTTTGTGCCCTGAACCGTATCCAGAAACGACTGCGGAGTTTTTGAAGGTCAACGGAATAAGGCTTTATCAATTTGGGATCGATGGCTGTAAGAGTTACTTGATTCCAAACGTATTGCATACTTGCGTGATGCTTTTGAAAATTGTCAAGCCACTCTTCTATTTATTTGCTGGATACAATTCAATTAGTAATTTGAAGAAGAGTTTGAACATCTGA 423 0.4421 MKLENSSNSNGQMSLAGDVSPPHHNADDAEEIFVPPLNFAMVDNGIFRSGFPDAANFGFLKSLRLRSVICLCPEPYPETTAEFLKVNGIRLYQFGIDGCKSYLIPNVLHTCVMLLKIVKPLFYLFAGYNSISNLKKSLNI 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi71g00086 140 PRINTS Plant and fungal dual specificity phosphatase signature 89 103 IPR020428 GO:0016791
Sebi71g00086 140 PRINTS Plant and fungal dual specificity phosphatase signature 70 83 IPR020428 GO:0016791
Sebi71g00086 140 PRINTS Plant and fungal dual specificity phosphatase signature 33 50 IPR020428 GO:0016791
Sebi71g00086 140 MobiDBLite consensus disorder prediction 1 16 - -
Sebi71g00086 140 Pfam Tyrosine phosphatase family 34 118 IPR004861 -
Sebi71g00086 140 PANTHER TYROSINE-PROTEIN PHOSPHATASE 31 99 - -
Sebi71g00086 140 MobiDBLite consensus disorder prediction 1 23 - -
Sebi71g00086 140 Gene3D Protein tyrosine phosphatase superfamily 32 121 IPR029021 -
Sebi71g00086 140 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 33 118 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi71g00086 Sebi-Chr71 887319 888045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi71g00086 17 100 Protein tyrosine phosphatase (PTP) family AT1G05000 63.095 7.07e-34 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi71g00086 K18045 - gmx:100785520 163.31