Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi71g00022 ATGTATCAGCCGAAGAATTTTCCTAGTTCAAGTATAGTTGGAAGTAACTCATTAGTTCATGATCAGCATATGGATTGTGGTGGCACTAGCAGCACAATGGATCCTGTCAATGTGGGGAGCACTCTCACCAACAACCCTGGTCTCGCTTCCAAGCAGCGTTTACGCTGGACGAATGAACTACATGAACGTTTTGTTGATGCTGTGGCACAACTTGGCGGCCCAGATCGTGCCACACCTAAAGGTGTCCTGAGAGTTATGGGTGTACCGAGCTTAACAATATACCATGTCAAAAGCCATTTACAGAAATATCGACTAGCAAAATACTTACCTGACTCCTCATCAGATGGGAAAAAAGCGGACATGAAAGAAACAAGGGATATTGTTTCCAATCTAGATGGTTCATCTGGGATGCAAATTACCGAAGCACTTAAGCTTCAAATGGAGGTGCAAAAGAGACTGCATGAGCAATTAGAGGTGCAGAGACAGCTACAATTACGGATAGAAGCCCAGGGTAAATACTTGAAGAAAATCATTGAAGAGCAGCAGCGGCTCAGTGGGGTTCTTTCAGAAACACTTGACTCTGGGGTTGCAGCTCCTGCTCCAGGGGATATGTGCCAAGAACCTGATAACAAGACGGACCCAGCAACCCCTGCCCCAACTTCTGAGTGCCCCCTTCTAGAGAAAACTGCCAAAGAGCGTGCCCCAGTTAAGAGTATTTCCATGGATGAATCTTTTTCATCTCATCATGAACCATTGACACCAGATTCTTGTCGCCATGTTGGTTCCCCTACTAACAGTCCTAAAGGAGAGAGGTCAACAAAGAAGCAATGGGGGAGCATGGAGGGAGCATATTCTAAACCAGAAATGGTGCTTCCGCATCAGATACTTGAGTCAAGTATACCATATCAGTAA 912 0.455 MYQPKNFPSSSIVGSNSLVHDQHMDCGGTSSTMDPVNVGSTLTNNPGLASKQRLRWTNELHERFVDAVAQLGGPDRATPKGVLRVMGVPSLTIYHVKSHLQKYRLAKYLPDSSSDGKKADMKETRDIVSNLDGSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSETLDSGVAAPAPGDMCQEPDNKTDPATPAPTSECPLLEKTAKERAPVKSISMDESFSSHHEPLTPDSCRHVGSPTNSPKGERSTKKQWGSMEGAYSKPEMVLPHQILESSIPYQ 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi71g00022 303 Gene3D - 50 109 - -
Sebi71g00022 303 FunFam Myb family transcription factor 50 108 - -
Sebi71g00022 303 MobiDBLite consensus disorder prediction 258 273 - -
Sebi71g00022 303 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 38 298 IPR044848 GO:0003700
Sebi71g00022 303 Pfam Myb-like DNA-binding domain 54 104 IPR001005 -
Sebi71g00022 303 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 48 108 IPR017930 -
Sebi71g00022 303 SUPERFAMILY Homeodomain-like 50 105 IPR009057 -
Sebi71g00022 303 Coils Coil 140 160 - -
Sebi71g00022 303 Pfam MYB-CC type transfactor, LHEQLE motif 137 183 IPR025756 -
Sebi71g00022 303 MobiDBLite consensus disorder prediction 194 303 - -
Sebi71g00022 303 NCBIfam myb-like DNA-binding domain, SHAQKYF class 51 106 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi71g00022 Sebi-Chr71 250595 253600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi71g00022 86 300 G2-like Transcription Factor Family AT2G01060 66.977 1.99e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Sebi71g00022 Myb_DNA-binding 2.7e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi71g00022 - - hbr:110654981 461.455