Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi71g00020 ATGGACATGGAGGATCGAGATCAACTATCTCCGGCGGGTGCCGTTGGTGTAAGTAATGACGAGAAAGAGCAGCAAGCAGCGGGAGTGGGGATTCTTCTTCAGATCATGATGTTAGGTTTGTCTTTCGTTTTGGGTCACGTTCTTCGTCGCAAGAAAATTTACATTCTTCCCGAAGCCAGCGCTTCTCTTCTCATTGGCTTACTCGTTGGTGCACTTGCTGACATTTCTAACACTCAAACCAGCATCAGTTATCTCGGTGGTTTGATCTACCTCATGTACAGACTGCCTTTTGTTGAGTGTCTAATGTTCGGTGCTCTTATATCAGCAACTGATCCTGTCACTGTTTTGTCCATTTTTCAGGAGCTTGGCACAGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCTATTTCTCTCTACAGGACAATGTCAGTGGTTAAAACTCATCCGTCTGGACAAAATTTCTTCATGGTGGTTGTTGGATTTTTGGAGACTTTCATTGGGTCAATGTCTGCTGGTTGGTACATGCTTGCAGAAGGTCTTGGCCTGTCTGGTATTGTATCAATATTGTTCACGGGAATGGTCATGAAGCATTACGCATATTCAAATTTGTCACAAAATTCTCAAAGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAGACATTTGTATTTATCTACATGGGCTTTGATATTGCTTTGGAGAAGCATAGCTGGTCACACGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCAGCCAATGTATTCTCTTGTGCTTATCTGGTCAACTTGGTCAGACCTGCACATCAACAAATACCTCCAAAACACCAGAAAGCACTTTGGTATAGTGGTCTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGACAGACCATCTTCACTGCAACAACAGCAATAATTGTTTTGACGGTATTACTAATTGGTGGTTCAACGGGTACCATGCTGGAAGCTTTAGATGTTACAGGTGGTGACAGTCATATTAATGATAGCTCATTGGCTTCAGTCGGTACCATAACAAAATTTGAGGAAAACGATGGTTATATTTCTCCTTCGTATGATGAAGAATCGTCGTCAGGGAACAAAATCAAAATGAAACTACAAGAATTCCACAGGAGTGCTGCATCTTTTACAGCATTAGATAGAAACTACCTCACCCCATTCTTTACTAGTCAAAATGGAGATGAGGAAGATGAAGCTACTGAGCTTCTGACTTCTGGAAGAGCGGGATTCCACAGCCATGACCATGACCAAGACAATGACCCTCATTCGTCATGA 1371 0.4201 MDMEDRDQLSPAGAVGVSNDEKEQQAAGVGILLQIMMLGLSFVLGHVLRRKKIYILPEASASLLIGLLVGALADISNTQTSISYLGGLIYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSVVKTHPSGQNFFMVVVGFLETFIGSMSAGWYMLAEGLGLSGIVSILFTGMVMKHYAYSNLSQNSQRFVSAFFELISSLAETFVFIYMGFDIALEKHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLVRPAHQQIPPKHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIIVLTVLLIGGSTGTMLEALDVTGGDSHINDSSLASVGTITKFEENDGYISPSYDEESSSGNKIKMKLQEFHRSAASFTALDRNYLTPFFTSQNGDEEDEATELLTSGRAGFHSHDHDQDNDPHSS 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi71g00020 456 MobiDBLite consensus disorder prediction 1 21 - -
Sebi71g00020 456 MobiDBLite consensus disorder prediction 440 456 - -
Sebi71g00020 456 MobiDBLite consensus disorder prediction 419 456 - -
Sebi71g00020 456 Pfam Sodium/hydrogen exchanger family 177 348 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Sebi71g00020 456 PANTHER SODIUM/HYDROGEN EXCHANGER 85 437 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Sebi71g00020 456 Gene3D - 97 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi71g00020 Sebi-Chr71 224165 230205 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi71g00020 101 420 Antiporters AT3G05030 28.836 1.43e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi71g00020 K14724 - gmx:100790830 648.277