Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi719g00033 ATGGCCGTCACTCAAGCCAACTCCTCCCTCGAGGATCAGAGCCAAGTCTTTGTGTCCCCTTCCACCACTTACGTTGGCGTTTATGACGGCCATGGCGGCCCCGAAGCTTCTAGATTCGTCGCCAAACGTCTCCTTCCTTATTTGCATATCCTTGGCAAGACAAACTCCAAGGCAGAACGCTTATCAGTGGATCATAATGTCTCTGATGAGGAGATCAGGAAAGAGGTCGAAGCTCTTCATCCTCATGATTCACACGTTGTTCTTCGTACCCGTGGTGTCTGGAGGATTAAGGGCATCATACAGGTGTCAAGATCTATTGGTGATGTGTATCTCAAGAGACCTGACTTTTACAGAGACCCAGTTTTTCAGCAATTTGGAAATCCCATTCCTTTGACTCGTCCTGTAATGACAGCTGAACCATCCATAACTGTTAGGGAGCTTCAACCGGAAGATCTGTTCCTCATATTTGCATCCGACGGACTTTGGGAACAATTAACTGATCAAGAAGCTGTTGACATTGTTTTCAAATATCCCAGAGCTGGAATTGCCAAGAGATTAGTGAGAGCTGCTCTTCAAGTAGCTGCAAAGAAGAAAGAGATCAGATATGACGACTTAAAGAAGATTGACAAGGGAATCAGACGGAATTTTCATGATGATATCACTGTTGTTGTCATCTATCTTGATCACCACAAACACTCTAAGCATCGCTCTACAACTGCTCCTATTGACATTTACTCCCCAGACGACGAGGAAGCAGAACAATGTATGCTCGCCGCAGTTGCCTAA 786 0.4542 MAVTQANSSLEDQSQVFVSPSTTYVGVYDGHGGPEASRFVAKRLLPYLHILGKTNSKAERLSVDHNVSDEEIRKEVEALHPHDSHVVLRTRGVWRIKGIIQVSRSIGDVYLKRPDFYRDPVFQQFGNPIPLTRPVMTAEPSITVRELQPEDLFLIFASDGLWEQLTDQEAVDIVFKYPRAGIAKRLVRAALQVAAKKKEIRYDDLKKIDKGIRRNFHDDITVVVIYLDHHKHSKHRSTTAPIDIYSPDDEEAEQCMLAAVA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi719g00033 261 SMART PP2C_4 1 225 IPR001932 -
Sebi719g00033 261 Pfam Protein phosphatase 2C 50 196 IPR001932 -
Sebi719g00033 261 CDD PP2Cc 5 227 IPR001932 -
Sebi719g00033 261 ProSitePatterns PPM-type phosphatase domain signature. 24 32 IPR000222 GO:0043169
Sebi719g00033 261 ProSiteProfiles PPM-type phosphatase domain profile. 1 227 IPR001932 -
Sebi719g00033 261 PANTHER PROTEIN PHOSPHATASE 5 48 IPR015655 GO:0004722|GO:0006470
Sebi719g00033 261 Gene3D - 51 239 IPR036457 -
Sebi719g00033 261 Gene3D - 1 50 IPR036457 -
Sebi719g00033 261 SUPERFAMILY PP2C-like 7 229 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi719g00033 Sebi-Chr719 360426 361649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi719g00033 58 260 PP2C-type Phosphatase Gene Family AT4G33920 69.048 2.94e-102 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi719g00033 - K01102 cit:102616821 328.561