Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi718g00005 ATGCAGATACTGGAAGGACTTCTGAAATTACCAGAGAATAGGGAATGTGCTGACTGCAAAGCTAAAGGTCCAAGATGGGCTAGCGTAAATCTTGGCATCTTTATATGCATGCAGTGTTCAGGAATACATCGAAGTTTGGGGGTACATATATCAAAGGTTCGTTCAGCAACTCTGGACACTTGGCTCCCAGAGCAAGTTGCTTTCATTCATTCGATGGGAAATGAGAAAGCTAATAGTTACTGGGAAGCAGAACTACCTCCAAATTATGATAGAGTTGGAATTGAGAATTTCATTCGTGCGAAGTATGAAGAGAAGAGATGGGTTCCAAGGGATGGGAATCCAAAAACACCATCTGGACCAAGGGAAGAGAAAACTCCTTCACATTGGCAGAGGCCTGTGGAAAGAAGTGGGCATGGTTATGCAACTGTTTCTGAGAATACATTTGAGGAAAGGAAAAAAGTCCAACCATCAAATGCAATTCCTGCTACAAGAATTAGTGTTCCTGCTCCTCCCAAAACACCTGAGCAGGTAACCCCTGTTACCAAACCACACCATGTTGAGAAAGTGGAGCCAGTAGCACCACAACCACAAGCTGAAACTTCAAAGCAGGCTACAAACACAACTAAAAATACCCCTCCAAAAGTTGACTATGCTACAGATCTTTTCAACATGTTGTCTATGGATGGCCCAAGTGAAAATGGTTCTGAAGCAGCTGGTACTACTGCTGATGATAATAACTGGGCAGGCTTTCAGTCTGCTGCAGAGGTGTCAACAGCGGACAAAACTGGTCTGCCAAAAGCAGTCGAGAGTACTCCCCAGTCTGCATCTGGAATTGAGGATCTGTTTAAAGATTCACCTTCTGTGACACCAAGCTTAGCTCCATCACAACCACAGAAAGATGTGAAACATGATATCATGAGCCTCTTTGAGAAGAGCAATATGGTGTCTCCATTTTCTATGCATCAACAGCAGCTTGCCATGCTAGCACAGCAACAGTCTCTTCTAATGGCTGCTGCTGCTGCTAATTCTACTGGTGGAGATCCCAAGTATCCTGCTAGCATGCTACAACCTAGGCCCAATGTTCCTGTCCAAAATTGGCCAGCTACTGGGTACCCAATTTCTGGAGTAATGCCCATGGGCGGTCAGGGAGATCTGCAGAAACTTATGCAGACTAGGAACATGACTCCAGCACATGCAGCCGGGAGCTCTGTTCAATATTCACCAAATGGTTTCTATGCTATGGGGCAAGCGGGTCCAGTCAATGGTATGATGACAATGGGAACGAGTAAACCTCCGTCAACAACTCCAGTGTCATCATCCACTTCGAAGTCAGCAAAGGATTATGATTTTTCCTCCTTGACTCAAGGGATGTTTGCGAAACAGTGA 1386 0.4509 MQILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIHSMGNEKANSYWEAELPPNYDRVGIENFIRAKYEEKRWVPRDGNPKTPSGPREEKTPSHWQRPVERSGHGYATVSENTFEERKKVQPSNAIPATRISVPAPPKTPEQVTPVTKPHHVEKVEPVAPQPQAETSKQATNTTKNTPPKVDYATDLFNMLSMDGPSENGSEAAGTTADDNNWAGFQSAAEVSTADKTGLPKAVESTPQSASGIEDLFKDSPSVTPSLAPSQPQKDVKHDIMSLFEKSNMVSPFSMHQQQLAMLAQQQSLLMAAAAANSTGGDPKYPASMLQPRPNVPVQNWPATGYPISGVMPMGGQGDLQKLMQTRNMTPAHAAGSSVQYSPNGFYAMGQAGPVNGMMTMGTSKPPSTTPVSSSTSKSAKDYDFSSLTQGMFAKQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi718g00005 461 MobiDBLite consensus disorder prediction 108 131 - -
Sebi718g00005 461 MobiDBLite consensus disorder prediction 226 245 - -
Sebi718g00005 461 Gene3D Arf GTPase activating protein 1 114 IPR038508 -
Sebi718g00005 461 MobiDBLite consensus disorder prediction 254 300 - -
Sebi718g00005 461 CDD ArfGap 4 102 - -
Sebi718g00005 461 Pfam Putative GTPase activating protein for Arf 3 108 IPR001164 GO:0005096
Sebi718g00005 461 MobiDBLite consensus disorder prediction 426 461 - -
Sebi718g00005 461 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 2 461 IPR044520 GO:0005096
Sebi718g00005 461 MobiDBLite consensus disorder prediction 196 214 - -
Sebi718g00005 461 PRINTS HIV Rev interacting protein signature 53 74 IPR001164 GO:0005096
Sebi718g00005 461 PRINTS HIV Rev interacting protein signature 13 32 IPR001164 GO:0005096
Sebi718g00005 461 PRINTS HIV Rev interacting protein signature 32 49 IPR001164 GO:0005096
Sebi718g00005 461 SMART arf_gap_3 2 115 IPR001164 GO:0005096
Sebi718g00005 461 MobiDBLite consensus disorder prediction 108 216 - -
Sebi718g00005 461 ProSiteProfiles ARF GTPase-activating proteins domain profile. 1 115 IPR001164 GO:0005096
Sebi718g00005 461 FunFam stromal membrane-associated protein 1 isoform X1 1 113 - -
Sebi718g00005 461 SUPERFAMILY ArfGap/RecO-like zinc finger 2 109 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi718g00005 Sebi-Chr718 191965 196442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi718g00005 4 108 C2H2 Transcription Factor Family AT4G05330 49.558 1.78e-29 116