Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi718g00002 ATGATGTTATCAGCTTCGCCATCTACCCTTGCGAGAAGCTCTCTAGAAGAAATGCTTGAATCTCTTCGCCGGAGAGATGAAGAGGAGAAGCCGAAGGACCTGCCGCCGGCATTGCCGGCGAGGCCAACGTCGAGAGCTCGGTTACCGTCGGCGAGAAGGTCTTTGCCTAATAGCCTCAAGGTTGATGGAGGGAATGAGAAGGGCAAAGGGCACAAGAGGAAAGGTAGTTTTGGACACAAGAAGATGAAGATGGATTTGGAATCACCTTACGTGGCTGAATCAGAAGAGAAAATTAGTGAAAGATCATCACCGGGTCCCGTTTCAACATCTGCTGAGGATTCTGCTGCTTCTGTAGCTCCACCTTCCCGGGAATTGGAAGATGACAATGTTGCTTATTTCATAAAAAGGCAACCAAAAGGGAGGTGGGAACTGGGAAAGATACAGTCGACTTCAGGAGAGGAAGCATTGGTTTCACTCTCAGATGGAAATATTATGCAAGTTGCCAGAACAGAGCTCCTACCAGCTAATCCTGATATTCTAGAGGGTGTAGATGATCTTATACAGCTCAGTTATTTAAATGAGCCCTCAGTTCTTCACAATCTTAAATTCAGATATTCTCAAGATATGATTTACAGTAAAGCAGGGCCAATTTTAATTGCACTCAATCCCTTCAAAGATGTACAGATTTATGGAAATGATTATATCTCAGCTTATAGGCAGAAATTTGTTGATAGTCCTCATGTTTATGCTATGGCATATGCAGCTTATAATGAGATGATAAGAGATGAAGTAAATCAGTCCATTATCATAAGTGGCGAGAGTGGATCTGGGAAAACAGAGACAGCAAAATTTGCTATGCAATACTTAGCTGCTCTTGGTGGTGGCAGTTGTGGGTTAGAAAATGAAGTTCTTCAGACAAATTTTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCACTCTGGGGAAAATTTGTGGGGCTAAAATTCAAACCTTTCTATTAGAAAAGTCAAGAGTTGTTCAATTGGCCAGTGGCGAGAGGTCATATCATATATTTTATCAACTTTGTGCTGGATCTTCACCTGATCTTAAAGAGAGACTGAATCTTAGAGTGGCCAGCGAATATAAATATCTTAATCAGAGTGACTGCATGGCAATTGATGGTGTTGATGATGCTAAAAAGTTTCATAGGCTGATGAAAGCATTGGATGTTGTTCAGATGTGCAAAGAGGATCAAGAGGCGGTCTTTAAGATGCTCACTGCGATATTATGGCTGGGAAATATATCATTCCAAGTTAATGATAATGAAAATCATGTTGAGGTCGTGAATAATGAAGCTGTAACCAGTGCTGCTTTGCTCATGGGTTGCAGTTCTCAGGAGTTAATGACAGCATTATCTACCCATAAAATCCAAGCTGGCAAGGATACTATTACCAAAAGATTAACGTTGCAGCAGGCAATAGATGCAAGAGATGCTTTAGCAAAATTTATCTATGCAAGCTTGTTTGACTGGCTTGTAGAACAAGTTAACAAGTCACTTGAAGTGGGTAAACGACGTACTGGGAGATCCATAAGTATCCTTGATATTTATGGATTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTTTGTATAAATTATGCTAATGAGAGGCTTCAACAACATTTCAATCGGCACCTGTTTAAACTTGAGCAGGAGGACTACGAATTAGATGGCGTTGATTGGACCAAAGTAGATTTTGAGGACAATCAAGTGTGCTTGGATCTCTTTGAGAAGAAGCCTTTGGGACTGTTCTCTTTGTTAGATGAGGAATCAAATTTCCCCAGGGCCACTGATATAACACTTGCCAACAAACTTAGGCAGCACCTGCACACTAATCGTTGCTTTAAAGGGGAAAGAGGCAGGGCTTTCAGTGTTTGTCATTATGCAGGGGAGGTTTTGTATGATACAAATGGCTTTCTAGAAAAGAACAGAGATCCACTGCCTTCTGATTCCATTCAACTACTGTCATCATGTAGTTGTGAATTGCTGCAGTTGTTCTCCAAGATGCTTAACACATCTCAGAAGCAATCAAATTCCCTGCACATAGGTGCTCTGGATTCACAAAAGCAGAGTGTTGGCACAAAGTTCAAGGGTCAATTGTTCAAGTTGATGCATCAGTTGGAGAGCACCACACCTCACTTTATTCGGTGTATAAAGCCAAATACTAAGCAACTTCCTGGCATATATGATGAAGATCTTGTCCTGCAACAGCTCAAGTGTTGTGGAGTTTTGGAGGTTGTACGGATTTCAAGGGCTGGATATCCTACTCGAATGACACACCAAGAGTTTGCCAGAAGGTACGGGTTTCTGCTTTCTGAGGCCAATTCATCTCACGATCCATTGAGCATCTCAGTTGCTGTTTTGCAACAATTTAATATCCCTCCTGAAATGTACCAAGTTGGCTTCACCAAACTGTATCTTCGAACAGGGCAGGTTGGTGCACTGGAGGATAGGAGAAAACAGGTTTTGCAGGGAATAGTTGGGGTTCAAAAATGCTTTCGTGGCCATCGAGCTCGCAATTATTACCATGAACTTCAGAATGGAGTGACAACTTTACAATCATTTGTTCGTGGAGAAATTGCAAGAAGGAAATATGGTGTTATGGTAAAGTCTTCCATAACTATTTCTTCTGAAAAAATTGAGGAGATAGAGGCAATCATAATGCTACAATCTGTAATTCGTGGGTGGCTGGTTCGAAGGCATGCCTTGAATAAGTTTAAGAAATATCCTGAAAATGCAAAACCTCGGCGAAAGTCACGTGTGAAAATGCCAGAAGTCAAGGATGTGTCCAATGAACGGTTCCAGAATCTGCCTTCAGCTTTGGCAGAACTCCAAAGGCGGGTTGTCAAGGCTGAAGCAACCATAGAGCAAAAGGAAGAGGAAAATGCTGAATTGAGGGAACAGCTAAAACAATTTGAGAGAAGGTGGATTGAATATGAGACAAAGATGAAATCAATGGAGGAGATGTGGCAAAAACAAATGGCATCTTTGCAAATGAGTCTTGCTGCTGCTAGAAGCAGCCTTGCTTCTGTGAATGCCACTGGTCAACATGTAAGACATGATGTTGCATCATCTTTTTGCTATGATTCTGAAGATGCTACTTCCATGGGATCTCGAACTCCTCGAACGCCTGGTGCCAGCACACCTTTGAAGTATTCTAGCAGTCTTTCTGAAGTTGCAACAAGGAGAGATGCTAATGGTACTTTGCCTACAGTCAACAATCTAATGAAGGAATTTGAGCAGTCCAGACAGACCTTTGATGATGATGCCAAAGCTCTTATTGAAGTTAAAACCGGGCAATCCGCGAGCACGAATTCCATTGAAGAACTCAGGAGACTCAAACATAGGTTTGAGGGGTGGAAGAAAGAATACAAGCTTAGATTAAGAGAGACAAAAGCAAGACTTTATAAATTGGGGAATTCAGAAATGGATAAAAGCCGGAGAAAATGGTGGGGGAAGTTAAGTTCTAGAGGACTATAG 3573 0.4153 MMLSASPSTLARSSLEEMLESLRRRDEEEKPKDLPPALPARPTSRARLPSARRSLPNSLKVDGGNEKGKGHKRKGSFGHKKMKMDLESPYVAESEEKISERSSPGPVSTSAEDSAASVAPPSRELEDDNVAYFIKRQPKGRWELGKIQSTSGEEALVSLSDGNIMQVARTELLPANPDILEGVDDLIQLSYLNEPSVLHNLKFRYSQDMIYSKAGPILIALNPFKDVQIYGNDYISAYRQKFVDSPHVYAMAYAAYNEMIRDEVNQSIIISGESGSGKTETAKFAMQYLAALGGGSCGLENEVLQTNFILEAFGNAKTSRNDNSSRFGKLIEIHFSTLGKICGAKIQTFLLEKSRVVQLASGERSYHIFYQLCAGSSPDLKERLNLRVASEYKYLNQSDCMAIDGVDDAKKFHRLMKALDVVQMCKEDQEAVFKMLTAILWLGNISFQVNDNENHVEVVNNEAVTSAALLMGCSSQELMTALSTHKIQAGKDTITKRLTLQQAIDARDALAKFIYASLFDWLVEQVNKSLEVGKRRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGVDWTKVDFEDNQVCLDLFEKKPLGLFSLLDEESNFPRATDITLANKLRQHLHTNRCFKGERGRAFSVCHYAGEVLYDTNGFLEKNRDPLPSDSIQLLSSCSCELLQLFSKMLNTSQKQSNSLHIGALDSQKQSVGTKFKGQLFKLMHQLESTTPHFIRCIKPNTKQLPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFARRYGFLLSEANSSHDPLSISVAVLQQFNIPPEMYQVGFTKLYLRTGQVGALEDRRKQVLQGIVGVQKCFRGHRARNYYHELQNGVTTLQSFVRGEIARRKYGVMVKSSITISSEKIEEIEAIIMLQSVIRGWLVRRHALNKFKKYPENAKPRRKSRVKMPEVKDVSNERFQNLPSALAELQRRVVKAEATIEQKEEENAELREQLKQFERRWIEYETKMKSMEEMWQKQMASLQMSLAAARSSLASVNATGQHVRHDVASSFCYDSEDATSMGSRTPRTPGASTPLKYSSSLSEVATRRDANGTLPTVNNLMKEFEQSRQTFDDDAKALIEVKTGQSASTNSIEELRRLKHRFEGWKKEYKLRLRETKARLYKLGNSEMDKSRRKWWGKLSSRGL 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi718g00002 1190 MobiDBLite consensus disorder prediction 1063 1082 - -
Sebi718g00002 1190 MobiDBLite consensus disorder prediction 1 15 - -
Sebi718g00002 1190 MobiDBLite consensus disorder prediction 1 123 - -
Sebi718g00002 1190 ProSiteProfiles Myosin motor domain profile. 181 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi718g00002 1190 Coils Coil 972 1020 - -
Sebi718g00002 1190 Gene3D - 364 420 - -
Sebi718g00002 1190 MobiDBLite consensus disorder prediction 80 100 - -
Sebi718g00002 1190 ProSiteProfiles IQ motif profile. 876 905 IPR000048 GO:0005515
Sebi718g00002 1190 MobiDBLite consensus disorder prediction 17 35 - -
Sebi718g00002 1190 Pfam Myosin head (motor domain) 183 839 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi718g00002 1190 Gene3D - 552 741 - -
Sebi718g00002 1190 MobiDBLite consensus disorder prediction 101 116 - -
Sebi718g00002 1190 FunFam Myosin heavy chain 364 420 - -
Sebi718g00002 1190 FunFam Myosin IE heavy chain 421 529 - -
Sebi718g00002 1190 CDD MYSc_Myo8 195 839 IPR036022 -
Sebi718g00002 1190 ProSiteProfiles IQ motif profile. 913 942 IPR000048 GO:0005515
Sebi718g00002 1190 ProSiteProfiles IQ motif profile. 855 882 IPR000048 GO:0005515
Sebi718g00002 1190 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 902 IPR027417 -
Sebi718g00002 1190 SMART iq_5 875 897 IPR000048 GO:0005515
Sebi718g00002 1190 SMART iq_5 912 934 IPR000048 GO:0005515
Sebi718g00002 1190 SMART iq_5 852 874 IPR000048 GO:0005515
Sebi718g00002 1190 FunFam Unconventional myosin-XIX 552 741 - -
Sebi718g00002 1190 PRINTS Myosin heavy chain signature 265 290 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi718g00002 1190 PRINTS Myosin heavy chain signature 540 568 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi718g00002 1190 PRINTS Myosin heavy chain signature 593 621 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi718g00002 1190 PRINTS Myosin heavy chain signature 308 335 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi718g00002 1190 PRINTS Myosin heavy chain signature 211 230 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi718g00002 1190 SMART MYSc_2a 175 852 IPR001609 GO:0003774|GO:0005524|GO:0016459
Sebi718g00002 1190 Gene3D Myosin VI head, motor domain, U50 subdomain 421 529 - -
Sebi718g00002 1190 Gene3D Kinesin motor domain 180 784 IPR036961 -
Sebi718g00002 1190 Gene3D - 856 903 - -
Sebi718g00002 1190 Gene3D - 785 852 - -
Sebi718g00002 1190 PANTHER MYOSIN 174 1182 - -
Sebi718g00002 1190 Pfam IQ calmodulin-binding motif 880 896 IPR000048 GO:0005515
Sebi718g00002 1190 Pfam IQ calmodulin-binding motif 857 874 IPR000048 GO:0005515
Sebi718g00002 1190 Pfam IQ calmodulin-binding motif 915 932 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi718g00002 Sebi-Chr718 48868 58085 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi718g00002 1 1184 Myosins gene family AT5G54280 63.430 0.0 1564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi718g00002 K10357 - gmx:100801876 1924.83