Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi716g00034 ATGGGTGATAATGTTGATGGTATCAGTAACGGTAGTGGTGGATTGGAAAATATAGAGGAGGTAACTGAAGATGTTGTTGAGGTGGCTTATGAGTTTTACAATTGGTATGGAAGAATGAAAGGATTCTCGGCAAGGAGGGGCAAAGTTCGAAAAAACAGGGATAAAGAAATTTTGGAGAAGACATTCTTCTGTCATAGGGAAGGAAAGAGGAAGAAAAAAAATGATGATGATGAGGAGGAGGAGGAAGTAGTGCGTGAACCTAGACCTGAGACAAGAACAGAATGTAAAGGATTGATGAAGGTCCGTGTTGATTGTGTTAGTGGGAGGTGGCATGTTTGTAAGTTCATTGAAGAGCACAACCACAGACTATTGAAAAAAATACATACATCAATGTTGCCTGCCCATAGGAAAATGACTGATGCGGATATAATGCAACTGAACAATTTGCGTAAGGTTGGCATAAGCACACCCCACATATATGGATCTTTTGCAAGCCAGTCAGGTGGATTTCAGTATGTTGGATTTTCTAAAAGAGACATGTATAACCAGATTGGTAGGCAAAGGATGATGCAGGCTACGGATGTAAAGGGTGCATTTCAATACCTACGTGATATTGGTAATTGTAATGGACCTATGTTTTGGAGCCATACTATTGATAATGAAGAGTGTGGACTTGAGGAAAATACTTGGGTCAAAGAAATGTATGAGAAAAGGCGCAGGTGGGCATCTTGCTATATTAGGGGTCAATTCTTTGTAGGAATAAGGACTACATCACGGTGTGAGGGGCTCCATGCTCAACTTGGGAGATGGACAATGGCTGTGAAAGAAAAAATGTATGAGTTGTGTGATCAACGTAGCTCAATGTGGGATTCTGTTTTTATGGCTCGATGTGGGTGTTTAGATGCTTTGTCTAGAAAAGTTAACAGGTTGGCTGCGAAGTCAACTGTTAGATTTAATGCCATGAGAGATCTACTCACTGAGCAACTTAAGAAGATGGAAGACACAAATGAAGGGAACAATGAAGAGAATGAAGCTTGCAATCAATCAACACACAGAGAGGTGAGGGATCCAGTTAGAGTTGGTAGCAAGGGGTGTGCTGTCAATTCATCACCGAATTGTTCTCAAAAAAAGCGACGACAAAAGTGTGGCCTATGTGGTAAAGTCGGTCATAATAGGAAGACATGTTTGCTAAAGAGTAATTTGACCATGGCATGA 1215 0.4091 MGDNVDGISNGSGGLENIEEVTEDVVEVAYEFYNWYGRMKGFSARRGKVRKNRDKEILEKTFFCHREGKRKKKNDDDEEEEEVVREPRPETRTECKGLMKVRVDCVSGRWHVCKFIEEHNHRLLKKIHTSMLPAHRKMTDADIMQLNNLRKVGISTPHIYGSFASQSGGFQYVGFSKRDMYNQIGRQRMMQATDVKGAFQYLRDIGNCNGPMFWSHTIDNEECGLEENTWVKEMYEKRRRWASCYIRGQFFVGIRTTSRCEGLHAQLGRWTMAVKEKMYELCDQRSSMWDSVFMARCGCLDALSRKVNRLAAKSTVRFNAMRDLLTEQLKKMEDTNEGNNEENEACNQSTHREVRDPVRVGSKGCAVNSSPNCSQKKRRQKCGLCGKVGHNRKTCLLKSNLTMA 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi716g00034 404 Coils Coil 322 342 - -
Sebi716g00034 404 Pfam FAR1 DNA-binding domain 31 124 IPR004330 -
Sebi716g00034 404 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 183 - -
Sebi716g00034 404 MobiDBLite consensus disorder prediction 332 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi716g00034 Sebi-Chr716 476644 478949 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi716g00034 FAR1 4.1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi716g00034 - - mtr:112420123 191.43