Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi716g00023 ATGCAACAACAAAGTGGTGTGGCGTGGCACAGGGATGTCGGGGAGGGGCAGGGCCATGGTGGTCACTGGGGCGACCCTTTTCTCTATTTTGGATGGCGATGTGGTACAACGACGAACAGGAAAAGGGCAACCAAGGAGGGGCGACTTGCAGTCCTTACTATCGGAGCAACGCCGAGAGCTCGCTGCTGCGGAAGCCATGGAATCCGACCTCGAATTCGCTTACCGCCTCCAGTTGCAGGAAGCCCTGGCCGCTTCCCTTACAACTCACCCCTCTTCCTCCTCCGTCGTCGTGCAAGAAGAGCCTGTCGTCGACGACACCGTTTGAAGATCACGTCCCTCCAGTTGGAGGAGCTCGCGACGATGGAGCGCGAAATGAAAGACCGGGAGCAGAGCGAGACGGAGATGCGGAAGATGAGGGAGGATCTCAACCGTCGAATTCATGACCAGAAGATGGCGTCGGAGATCGTCACCATTCCTGAGGATGATTGGCTGCAATGGGGAGATAATTTCGAGAAGCCATTTGGAGAGGGTTCTTCGAAGAAGGGGGAGGACGAAGGTGCTATTGTTAGGGTTTATTTCAAGGGTTTGGTGAGTGAGGAGAGTGTGAGGGGTGACAAGGCGGTGTTGGCTGGGATTGGGGTTGCGATTTGTGACCTTTCTGACAATTTGATACTGGAAGTTTCCAAGCCTCTTATTGGTAATGGAACCGGCAAGGTTGCTACGGAGCTTAAGGCTTTGATTGAAGCCTTTAATGCTGCCATTGCTTTGGACTTGCAGCGCGTCATCTATTTTAGCGATTACTATCCCCTCTTTCAATTTGTGAGTCCTCTCTCTTTCTCTCTCTTTATGGCTTCTTGA 858 0.528 MQQQSGVAWHRDVGEGQGHGGHWGDPFLYFGWRCGTTTNRKRATKEGRLAVLTIGATPRARCCGSHGIRPRIRLPPPVAGSPGRFPYNSPLFLLRRRARRACRRRHRLKITSLQLEELATMEREMKDREQSETEMRKMREDLNRRIHDQKMASEIVTIPEDDWLQWGDNFEKPFGEGSSKKGEDEGAIVRVYFKGLVSEESVRGDKAVLAGIGVAICDLSDNLILEVSKPLIGNGTGKVATELKALIEAFNAAIALDLQRVIYFSDYYPLFQFVSPLSFSLFMAS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi716g00023 285 Pfam Reverse transcriptase-like 206 275 IPR002156 GO:0003676|GO:0004523
Sebi716g00023 285 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi716g00023 Sebi-Chr716 345759 347904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi716g00023 190 275 C3H Transcription Factor Family AT2G19610 32.955 1.92e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi716g00023 - - gmx:100790037 240.736