Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi716g00022 ATGGCCAAAAAGTGCAGCTTGGCCAGAAGCACCAGGTCTTGGCTGGAATCTCACCTGAGGGTTGCACAGTGGTTTTTCGCAGTGTCTCACTGGGGTTGTGCAGTAGTTGCAAGTTGCAAGGTCCCTTGGCATAGTGGTATGACATGTTATACTTACAAGAGGTTGAATCCTAACCCGCCAGCAGAAGACGTAAAGCTGAAGTCTCTGGCAACAAGGAGTCTTTGGCGGCAGTGTGTGAAGTGTAACCATTTGATCGAACTTGCTGAAGGCTGCTATCACATGACTTGCAGATGTGGTTATGAATTTTGCTATAACTGTGGAGCTCAGTGGAAGGACAAAAAGCAACATGTTCTTGTCCACTTTGGGTCGAGGACAATATTTGGTTAG 387 0.4703 MAKKCSLARSTRSWLESHLRVAQWFFAVSHWGCAVVASCKVPWHSGMTCYTYKRLNPNPPAEDVKLKSLATRSLWRQCVKCNHLIELAEGCYHMTCRCGYEFCYNCGAQWKDKKQHVLVHFGSRTIFG 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi716g00022 128 Pfam IBR domain, a half RING-finger domain 66 112 IPR002867 GO:0008270
Sebi716g00022 128 Gene3D - 47 124 - -
Sebi716g00022 128 CDD Rcat_RBR_unk 75 110 - -
Sebi716g00022 128 SUPERFAMILY RING/U-box 64 114 - -
Sebi716g00022 128 SMART ibrneu5 62 118 IPR002867 GO:0008270
Sebi716g00022 128 ProSiteProfiles TRIAD supradomain profile. 1 128 IPR044066 -
Sebi716g00022 128 FunFam RBR-type E3 ubiquitin transferase 47 125 - -
Sebi716g00022 128 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 32 113 IPR031127 GO:0004842|GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi716g00022 32 108 C3H Transcription Factor Family AT2G19610 35.897 9.28e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi716g00022 - - aprc:113858620 169.474