Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi716g00005 ATGAGACAATTAGTGTGTAACAAGGAGGGGGAGAGAAGTGAGAAGCATCTTAATAGGATTGATAGAAAAAGGGAGGCAAAGGCCATTACACGATCAAATTGTAAAGCAAGGCTCCGAATTCATTTAGATTATAAGAGTAGGAAGTGGATTGTTAGTTGTTTTGAGCCAGATCACAACCATGAATTGACACCTGCTAGTATGGTTCATTTGATGCCTGCTTATCGTGGGTTGAGTGTAGCTGATAAGGCACAGGTTGAAGGTCTTCATTTATATGGTGTGAGGACTTGCCATATTATGGGTCTTATAATGGGTCAGAAAGGGGGTTATTCAGATATTGGATTTTGTAAGAAAGATTTGTACAACCACATTGATAAGGTGAACAGGGCAAAAATTGAGGATGGTGATGCTTTTGCAGCCTTGTGTTACCTTCAGGCAAAAGAGAAGTTTGAGGATGAGTGGAACAAAGTTGTTGAGAAACATGGTGTTAGGGAAAATAAGCACAATGAGTTAACTTCAGATTTCAAGTCCACATACACTCAACCTGTGATGACAACAGCATTGGAGAAGTATGAACTTGAAGCTTCTAATGTTTACACGAGGAATAAGTTCTTTGATGTACGAAAGGAAATTGAAAAAGTTGCAGCCATTAATGTCATTGATAAGTCAGATGTTGGAAATGTAGTTACTTTGAGGTTGAAGAGATTTGGAAGTCCTGATAGTGAAAATGTAGTTCAGCTTGATAAGTCAAATGGTAATTTGCTTTGTGATTATCGTTTATTTGAATCTTGTGGCATCCTTTGTTCACATATATTTACTGCTATGAAGCATGAGCAAGTGGAATCCATTCCTGCATCTCTGATTTGCAAAAGATGGACCAAGTTAGCTATAGTTGACCACATTTCTGCTGTTTATGCTGAAGAAGGCGACACAACAAAGAAGGATTTAATGAGGTCTGGTGCTGTTGGTGCTGCATGTAACAGGCTTAACAAGGCTGCTCGTAGAAATCCTCACAATTTTGTCAGAAACATTGAATCTATTCATAAGTTAGCTGAACAGATGGAACGACAGGAAGGCATTGACTTGAACAGTGTTGATATGTCTCGAGTTGTGCGTGACCCTACAGTTGTTAAAACAAAAGGTGCTCCACGAAAGAATAAAAAAAGGACGAAGAAAATGAGATGTTCTTATTGTAAACGTGCAGGACACACAGTTAGGACATGCACAAAATATGCCACTCGTGATCAGTTGGATACAGTTGTTGAAGAGGAATCATCTGTTGAGACTAATGAAGACTCGAGAGACCAGAGTGTGTCTGTGAATCCTAATTTTTCCCGGGAAGTGAATCATGGACAATCTAAGAAGAAAATGAAACTTAATGAAAAAGTTAAAGACAATGAAGCAGTGAAACTTACTCAAGAATCTGTGAATGATTTGAGATCCAATGGTGTAAATAAGGCTCATAAGAGCGGTATGAGTTTGACTCCTGGTCAGAATGTTAAATCTGACTTCAATGTGGCTCAGATGAACACCCCCTCATTACCCTCATTATTTGTAAACAATGGCTACTATTCAGACATGAATACTTCCTTAACATCCGGACCTGTACATATAAGGCCTTCAATGATTTATGGATTTGGCGAAAGATTACCTGGTAGTAGGTCACAGTTCTTTAATCATCTCAATCTGGACAAAAGTGACAGTGGTTTAGGAAGGAGGAGCTTTATTGATACACCAAGAGATGGTTGA 1746 0.3872 MRQLVCNKEGERSEKHLNRIDRKREAKAITRSNCKARLRIHLDYKSRKWIVSCFEPDHNHELTPASMVHLMPAYRGLSVADKAQVEGLHLYGVRTCHIMGLIMGQKGGYSDIGFCKKDLYNHIDKVNRAKIEDGDAFAALCYLQAKEKFEDEWNKVVEKHGVRENKHNELTSDFKSTYTQPVMTTALEKYELEASNVYTRNKFFDVRKEIEKVAAINVIDKSDVGNVVTLRLKRFGSPDSENVVQLDKSNGNLLCDYRLFESCGILCSHIFTAMKHEQVESIPASLICKRWTKLAIVDHISAVYAEEGDTTKKDLMRSGAVGAACNRLNKAARRNPHNFVRNIESIHKLAEQMERQEGIDLNSVDMSRVVRDPTVVKTKGAPRKNKKRTKKMRCSYCKRAGHTVRTCTKYATRDQLDTVVEEESSVETNEDSRDQSVSVNPNFSREVNHGQSKKKMKLNEKVKDNEAVKLTQESVNDLRSNGVNKAHKSGMSLTPGQNVKSDFNVAQMNTPSLPSLFVNNGYYSDMNTSLTSGPVHIRPSMIYGFGERLPGSRSQFFNHLNLDKSDSGLGRRSFIDTPRDG 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi716g00005 581 PANTHER OS01G0519700 PROTEIN 2 152 - -
Sebi716g00005 581 MobiDBLite consensus disorder prediction 418 457 - -
Sebi716g00005 581 Pfam FAR1 DNA-binding domain 2 63 IPR004330 -
Sebi716g00005 581 MobiDBLite consensus disorder prediction 431 447 - -
Sebi716g00005 581 SUPERFAMILY Retrovirus zinc finger-like domains 380 411 IPR036875 GO:0003676|GO:0008270
Sebi716g00005 581 Gene3D - 373 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi716g00005 Sebi-Chr716 80838 83711 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi716g00005 FAR1 3e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi716g00005 - - vvo:131662316 238.424