Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi714g00003 ATGGGAAGGGCTCCTTGCTGTGACAAAGCCAACGTCAAGAAAGGGCCATGGTCTCCTGAAGAAGATGCCAAACTCAAATCTTACATCGACCAGCATGGTACCGGTGGTAACTGGATTGCCCTGCCTCAGAAGATAGCACAGTTACCAGGGCGGACAGATAATGACATAAAGAACTACTGGAACACAAGACTGAAGAAGAAGCTTCTAGGGAAGCAAAGGAAGGAGCAAGTTCGCAGAGTAAGCAGCCTGCAGAAGCAAGAGATCAAAACAGAAACAGAGAATTTGAATATGGTGTCTTCTGCTGCTGGAATACAACCTCCCTATTGGCCTCCACAGTATTCCATCCTCCCAGTACTGAAACACTATGATGTTGACATTAATCAAACATCCTTCCTCAATAACAAACATCCTTCAGGCACTGGAATTAGATTCTCCCTGCAGCAGCAGGATCATCACCAGCCATACACCAACACAATCACTCCCACCATAAATTCACAAGATGCATGTGATATTCCCTCCACACAAGACCAGCCTAATTATAATCACATCATAAATCCAGTGGCCAATGGTGGCAGTACTTATCATCCGCCATCAAATACATTAATGTTTGAAGGCTTCACAAGTGATTTGAGTGAACTGGTCTGTGTCAACCCCCAACAAATGGCAGGATTTTATGGAATGGAATATTCTATAGACATGAGCAATGGTAGCACCATCACTAGTTCAACAGAAAGCTCTAGCTGGGGAGATATGAGCATGACCTCTTTGGTTTACTCTCCTTTGCTTAATTCTGACTATCAAGCAGCTGGTTGCCGACACGGAATTCCTCAAGCTTTCGATGAGGAGTCTAGGTATTTTGGAATGCAAATGCAATAA 876 0.4406 MGRAPCCDKANVKKGPWSPEEDAKLKSYIDQHGTGGNWIALPQKIAQLPGRTDNDIKNYWNTRLKKKLLGKQRKEQVRRVSSLQKQEIKTETENLNMVSSAAGIQPPYWPPQYSILPVLKHYDVDINQTSFLNNKHPSGTGIRFSLQQQDHHQPYTNTITPTINSQDACDIPSTQDQPNYNHIINPVANGGSTYHPPSNTLMFEGFTSDLSELVCVNPQQMAGFYGMEYSIDMSNGSTITSSTESSSWGDMSMTSLVYSPLLNSDYQAAGCRHGIPQAFDEESRYFGMQMQ 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi714g00003 291 SMART sant 13 66 IPR001005 -
Sebi714g00003 291 PANTHER OS09G0431300 PROTEIN 46 202 - -
Sebi714g00003 291 SUPERFAMILY Homeodomain-like 8 70 IPR009057 -
Sebi714g00003 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 68 IPR017930 -
Sebi714g00003 291 CDD SANT 16 64 IPR001005 -
Sebi714g00003 291 ProSiteProfiles Myb-like domain profile. 9 64 IPR001005 -
Sebi714g00003 291 Gene3D - 11 69 - -
Sebi714g00003 291 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi714g00003 Sebi-Chr714 18742 20027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi714g00003 1 259 MYB Transcription Factor Family AT3G49690 36.223 1.04e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi714g00003 Myb_DNA-binding 3.9e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi714g00003 K09422 - gmx:100812816 190.274