Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi713g00001 ATGGCTGGGAAAGGCGAGGGTCCGGCGATCGGAATCGATTTGGGAACGACTTACTCTTGCGTTGGTGTTTGGCAGCACGATCGTGTTGAAATCATCGCCAACGATCAGGGTAACAGAACCACTCCATCCTATGTGGCTTTCACTGACACAGAGCGCTTGATCGGCGATGCGGCCAAGAACCAGGTCGCTATGAACCCAACCAACACTGTTTTGGTAAATGCTAAGCGTTTGATCGGAAGGCGTTTTAGCGATGCTTCAGTACAGAGTGACATGAAATTGTGGCCGTTTAAGGTGATTGCTGGCCCTGGTGACAAGCCTATGATTGTGGTTAATTACAAGGGGGAGGAAAAGCAATTTTCTGCTGAAGAGATATCTTCCATGGTTCTTATGAAGATGAAGGAGATTGCAGAGGCGTATCTAGGTTCCACGGTGAAGAATGCTGTAGTCACTGTTCCCGCTTACTTCAATGACTCGCAGCGTCAGGCTACCAAAGACGCTGGTGTCATTTCTGGGCTCAACGTGATGCGAATCATCAACGAGCCTACTGCGGCTGCCATTGCTTACGGACTTGACAAGAAAGCAACCAGCTCTGGTGAGAAGAACGTTCTCATTTTCGATCTCGGTGGTGGGACTTTTGATGTTTCTCTTCTCACCATTGAGGAAGGTATCTTTGAGGTGAAGGCTACTGCTGGTGATACTCACTTGGGAGGTGAGGATTTTGATAACAGAATGGTGAACCATTTCGTTCAAGAATTCAAGAGGAAGAACAAGAAGGATATTAGCGGAAATCCTAGGGCTCTTAGGAGGTTGAGAACTGCTTGTGAGAGGGCTAAGAGGACTCTCTCCTCTACAGCTCAAACTACCATTGAGATTGATTCATTGTATGAAGGTATTGACTTCTATACAACTATTACTCGTGCCCGGTTTGAAGAGCTCAACATGGATCTGTTCAGAAAGTGTATGGAGCCAGTGGAGAAGTGTTTGAGGGATGCTAAGATGGACAAGAGCACCGTCCATGATGTTGTTCTTGTTGGTGGATCTACAAGGATTCCCAAGGTCCAACAGCTTTTGCAGGACTTCTTTAATGGAAAGGAGCTTTGCAAGAGCATTAACCCAGATGAGGCTGTTGCCTATGGTGCAGCTGTTCAGGCTGCTATTTTGAGTGGAGAGGGCAATGAGAAAGTGCAGGATCTTTTGTTGCTGGATGTTACCCCTCTTTCCCTCGGTTTGGAGACTGCTGGAGGTGTCATGACTGTGTTGATTCCCAGAAACACAACCATTCCCACCAAGAAGGAGCAGGTGTTCTCAACCTACTCTGATAACCAGCCTGGTGTGTTGATTCAGGTCTATGAGGGAGAACGAACAAGGACTCGTGATAACAACTTGCTTGGCAAGTTTGAGTTGTCTGGCATTCCTCCTGCTCCAAGGGGTGTTCCACAGATCAATGTTTGCTTTGATATTGATGCCAACGGTATCTTGAATGTCTCTGCGGAGGACAAAACCACCGGACAGAAGAACAAGATTACAATTACCAACGACAAGGGCAGACTTTCCAAGGAGGAGATTGAGAAGATGGTGCAGGAAGCCGAGAAGTACAAGGCTGAGGATGAGGAGCACAAGAAGAAGGTGGAGGCCAAGAATGCACTGGAGAATTACGCCTATAACATGAGGAATACAATCAAAGATGACAAGATCTCTTCCAAGTTGCCAGCTGATGATAAGAAGAAAATTGAAGATGCTATCGAGCAGGCTATCCAATGGCTCGATGGAAACCAGCTTGCCGAGGCTGATGAATTTGAGGATAAGATGAAGGAGTTGGAAAGCATTTGCAATCCCATCATAGCTAGGATGTACCAAGGTGCTGGTGGTGATGCTGGTGGAGCCATGGATGAGGATGCTCCTTCTGCAGGTGGAAGTGGTGCTGGGCCCAAGATTGAGGAAGTTGATTAA 1950 0.4718 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVLVNAKRLIGRRFSDASVQSDMKLWPFKVIAGPGDKPMIVVNYKGEEKQFSAEEISSMVLMKMKEIAEAYLGSTVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPTAAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYTTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQINVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYAYNMRNTIKDDKISSKLPADDKKKIEDAIEQAIQWLDGNQLAEADEFEDKMKELESICNPIIARMYQGAGGDAGGAMDEDAPSAGGSGAGPKIEEVD 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi713g00001 649 PRINTS 70kDa heat shock protein signature 147 167 - -
Sebi713g00001 649 PRINTS 70kDa heat shock protein signature 370 390 - -
Sebi713g00001 649 PRINTS 70kDa heat shock protein signature 36 48 - -
Sebi713g00001 649 PRINTS 70kDa heat shock protein signature 210 220 - -
Sebi713g00001 649 PRINTS 70kDa heat shock protein signature 338 354 - -
Sebi713g00001 649 PRINTS 70kDa heat shock protein signature 397 416 - -
Sebi713g00001 649 PRINTS 70kDa heat shock protein signature 478 494 - -
Sebi713g00001 649 PRINTS 70kDa heat shock protein signature 8 21 - -
Sebi713g00001 649 PRINTS 70kDa heat shock protein signature 58 66 - -
Sebi713g00001 649 Gene3D - 10 385 - -
Sebi713g00001 649 Gene3D - 193 367 - -
Sebi713g00001 649 Gene3D - 546 620 IPR029048 -
Sebi713g00001 649 SUPERFAMILY Actin-like ATPase domain 198 389 IPR043129 -
Sebi713g00001 649 SUPERFAMILY Actin-like ATPase domain 8 192 IPR043129 -
Sebi713g00001 649 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 545 IPR029047 -
Sebi713g00001 649 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 550 IPR029047 -
Sebi713g00001 649 FunFam Heat shock 70 kDa 392 546 - -
Sebi713g00001 649 FunFam Heat shock 70 kDa 236 319 - -
Sebi713g00001 649 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Sebi713g00001 649 PANTHER HEAT SHOCK PROTEIN 70KDA 9 584 IPR013126 GO:0005524|GO:0140662
Sebi713g00001 649 Coils Coil 519 546 - -
Sebi713g00001 649 FunFam Heat shock 70 kDa protein 72 127 - -
Sebi713g00001 649 FunFam Heat shock 70 kDa protein 540 649 - -
Sebi713g00001 649 MobiDBLite consensus disorder prediction 620 649 - -
Sebi713g00001 649 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Sebi713g00001 649 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 625 IPR029048 -
Sebi713g00001 649 FunFam Heat shock 70 kDa protein 199 261 - -
Sebi713g00001 649 Pfam Hsp70 protein 9 619 IPR013126 GO:0005524|GO:0140662
Sebi713g00001 649 FunFam Heat shock protein 70 10 198 - -
Sebi713g00001 649 CDD HSPA1-2_6-8-like_NBD 9 388 - -
Sebi713g00001 649 Gene3D - 72 127 - -
Sebi713g00001 649 FunFam Heat shock cognate 70 kDa protein 2 320 367 - -
Sebi713g00001 649 Gene3D Actin; Chain A, domain 4 236 319 - -
Sebi713g00001 649 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi713g00001 Sebi-Chr713 457 2793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi713g00001 1 649 Calmodulin-binding Proteins AT3G12580 93.088 0.0 1233