Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi712g00014 ATGGGCCATCGTTGCTGCGGCAAACAGAAGATCAAAAGAGGATTGTGGTCTCCTGAAGAAGATGAGAAGCTTATTAGATATATCAAAACTCATGGCCATAAAAGCTTGCAGAGATGTGGAAAAAGTTGCAGATTGAGATGGATTAACTATCTGAGACCAGATCTAAAGAGAGGTTCATTCACTGCAGAAGAAGAACAGATCATAATTGACATTCATAGAATTCTGGGAAACAGATGGGCCCAAATAGCCAAACACCTCCCTGGAAGAACAGACAATGAGGTCAAGAATTTCTGGAACTCCTGCATTAAAAAGAAGCTTCTCTCTCAAGGGTTAGACCCACAAACCCACAATCTACTCTCATCTCATAAGAGAGCCTCAGCATGTACCATCTCTAACATGAATAATATCCATCAAAACTCCAATTCCATTTTCATTCTGAGTTCAAATGTTGATCCCATTGAAACTAGTACTCACCAAACATTTTCTTCACTACCTAAAGCTCCACCAATTATTCCTCAAACAAATTCTGCCATTGTTTCCTCTGAATATCAAACCTCATGCAATATTCTCTCAAATAAATTCTCTGATTTGCCCCATGAACTATTAGCAGCAGAGAACATAGCCAACATTTGTTCTACTTCCTGCATGAACCCTTCTGCTGTTGAATTGTCTAACAATGAGAATAGCATTTGGGTTTCAAGAGTTGGTACTGAAGAGGATTTTAGAGTTCAAACACTGGAAAAAGAAGAAGGAACACAAGTGCTGGTGCAGCAAGAGAAGGACAATGGAATTGATGTCAGAGTCAGAGAAGATAATAATCTTGAAATGAATAATGCTTCTTTTGAAGGTTCTAACTTTGATTTTGGGTTGTTGGAAAGTGTGCTTGCCTCTGAATTTATGTCTAATGATCTCAACTATATGGATGAACTTGCATGGAACTTTTAG 945 0.3841 MGHRCCGKQKIKRGLWSPEEDEKLIRYIKTHGHKSLQRCGKSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNSCIKKKLLSQGLDPQTHNLLSSHKRASACTISNMNNIHQNSNSIFILSSNVDPIETSTHQTFSSLPKAPPIIPQTNSAIVSSEYQTSCNILSNKFSDLPHELLAAENIANICSTSCMNPSAVELSNNENSIWVSRVGTEEDFRVQTLEKEEGTQVLVQQEKDNGIDVRVREDNNLEMNNASFEGSNFDFGLLESVLASEFMSNDLNYMDELAWNF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi712g00014 314 FunFam Transcription factor MYB86 58 134 - -
Sebi712g00014 314 PANTHER MYB DOMAIN PROTEIN 55 1 232 - -
Sebi712g00014 314 SMART sant 56 104 IPR001005 -
Sebi712g00014 314 SMART sant 12 53 IPR001005 -
Sebi712g00014 314 Pfam Myb-like DNA-binding domain 57 100 IPR001005 -
Sebi712g00014 314 Pfam Myb-like DNA-binding domain 13 51 IPR001005 -
Sebi712g00014 314 Gene3D - 58 130 - -
Sebi712g00014 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 106 IPR017930 -
Sebi712g00014 314 Gene3D - 15 56 - -
Sebi712g00014 314 ProSiteProfiles Myb-like domain profile. 52 102 IPR001005 -
Sebi712g00014 314 ProSiteProfiles Myb-like domain profile. 8 51 IPR001005 -
Sebi712g00014 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 51 IPR017930 -
Sebi712g00014 314 SUPERFAMILY Homeodomain-like 10 98 IPR009057 -
Sebi712g00014 314 CDD SANT 59 99 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi712g00014 Sebi-Chr712 348803 350434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi712g00014 1 124 MYB Transcription Factor Family AT3G12720 83.459 3.09e-81 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi712g00014 Myb_DNA-binding 1.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi712g00014 K09422 - gmx:100791209 438.728