Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi712g00011 ATGGAAGATAGCATGCATTGGGCCGAGAATGAAGGCCAATCGTGGCAGGGTTTGGAACAATTGTCCCTTTCTGGAGCAAATGTTGGTGAAAGTGCTGATGGTGGCGTTTCTAATGAAGGGGAGGATGAATATTTACATAGTGATGGAGATTCCGATACGGTCGAAGGTGTTAAAGTGGTTAATGGAGGGGACGAAACAAAAATGGGCATCAATAACAGTGAAGACATTAAGGGTTTGGACTTGGTGGGGTTTAGCCCCCATATGATAAGGCATTATGATTTTCCCAGTTGGGATATGGCGTACAAATTCTATTGCTCTTATGCTAAAGCAAATGGATTTAGTGTGAGGAAAGGTAGAGTTTTACGCAGTAAGAAAACAGGGTTGATGCTACAACATGATTTTTGGTGTTCTAACAAAGGTGTTCGGCAGGATAGGGGGCTGAAAATGGAAGATCGGAAGCGTGGGATTAAACCCGAAACGAGATGTAATTGTGAAGCTAACTTTAGAGTACATATTGACATTATCACTGGTCGTTGGTATGCAACTGTTTTTCTAGATGAGCACACCCATGACTTACTAGATCCAAAGCACAGTGGATTGCTTCCTGGTCATCGGAAGATGAGTGAGTCTGATATCAAAGAAATGAATGGCATGTTGCAAGCAGGCATTGGTCCAGCTCATATTTATGGTCATTTTTCTTTGCAATATGGGGGTTACGACAAAATTGGGTTTCGACTAAAGGATATTTATAATCAAATTGAAAGGCAAAGGCGCAAGCAATCATCTGATGCTATGGCTGCAATGGAATACCTAAGACGATTATCATGTGATGACAATGTGATGTTTATTGAGCATACTGTAGATGAAGAAGGTAGATTGCAACACCTGTTCTGGAGTGATGGTATTAGTCAAAAAAGTTACCAAGTTTTTGGTGATGTTGTTGCCTTTGATGCGACATACGGGAAGAATAAGTATTTATTACCATTGGTTGTCTTCTCTGGTGTGAATAATCATAACAGGTCTACCATTTTCGCTGCTGCAATTGTTGCTAATGAAATTGAAGACACTTATATCTGGTTGTTACGTCAATTTGCAAGGGTCATGAATGATAAGGAGCCAAGTGCTGTAATAACTGATGGAGACGTTGCAATGAGAAATGCTATCAAAATTACCACAATACAAGGATGA 1188 0.4032 MEDSMHWAENEGQSWQGLEQLSLSGANVGESADGGVSNEGEDEYLHSDGDSDTVEGVKVVNGGDETKMGINNSEDIKGLDLVGFSPHMIRHYDFPSWDMAYKFYCSYAKANGFSVRKGRVLRSKKTGLMLQHDFWCSNKGVRQDRGLKMEDRKRGIKPETRCNCEANFRVHIDIITGRWYATVFLDEHTHDLLDPKHSGLLPGHRKMSESDIKEMNGMLQAGIGPAHIYGHFSLQYGGYDKIGFRLKDIYNQIERQRRKQSSDAMAAMEYLRRLSCDDNVMFIEHTVDEEGRLQHLFWSDGISQKSYQVFGDVVAFDATYGKNKYLLPLVVFSGVNNHNRSTIFAAAIVANEIEDTYIWLLRQFARVMNDKEPSAVITDGDVAMRNAIKITTIQG 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi712g00011 395 PANTHER OS01G0519700 PROTEIN 91 390 - -
Sebi712g00011 395 Pfam FAR1 DNA-binding domain 102 193 IPR004330 -
Sebi712g00011 395 MobiDBLite consensus disorder prediction 18 56 - -
Sebi712g00011 395 Pfam MULE transposase domain 313 390 IPR018289 -
Sebi712g00011 395 MobiDBLite consensus disorder prediction 39 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi712g00011 Sebi-Chr712 281436 282713 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi712g00011 FAR1 4.7e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi712g00011 - - tpra:123913749 392.119