Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi711g00015 ATGCTTGCAAAGGCAGTTGCCACTGAAGCCGGTGCAAATTTCATTAACATTTCCATGTCAAGCATCACATCTAAGTGGTTTGGTGAGGGTGAAAAATATGTGAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCTCCTAGTGTGATATTTGTTGACGAAGTTGATAGCATGTTGGGCCGGAGGGAAAATCCAGGAGAGCATGAGACCATGCGAAAGATGAAAAATGAATGCATGGTGAACTGGGATGGCTTACGTACAAAGGATACTGAGCATAGGTGCTTTTTGAGTTTGTCATTATTCTTGACTGAACACGCTGCTGCGCTAGTGGAAGGAAGGCCTGCTCCAGCCTTGAGAGGAAGTGCAGATATCCGATCTTTAAACATGGAAGACTTCAAATGTGCTCATCAACAGGTATATGAAATGAAAATCTCTTTCTAG 438 0.4292 MLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHETMRKMKNECMVNWDGLRTKDTEHRCFLSLSLFLTEHAAALVEGRPAPALRGSADIRSLNMEDFKCAHQQVYEMKISF 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi711g00015 145 Gene3D - 1 87 IPR027417 -
Sebi711g00015 145 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 94 - -
Sebi711g00015 145 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 84 IPR027417 -
Sebi711g00015 145 Pfam ATPase family associated with various cellular activities (AAA) 1 87 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi711g00015 Sebi-Chr711 361137 361859 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi711g00015 2 88 Calmodulin-binding Proteins AT3G56690 33.333 2.48e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi711g00015 - - gmx:100778164 176.407