Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi70g00102 ATGGCCTCAAGCAAACAAAAGGCTTGTGATTCATCTTGGAGTGCAAAGCAGAACAAGCTTTTTGAGAAGGCACTTGCAAAATATGACAAAGATACCCCTGACCGTTGGCAGAATGTAGCCAAAGCAGTTGGTGGTAAATCAGCAGAGGAAGTTAAGAGACACTATGAGTTACTCTTGGAAGATCTCAGACACATAGAGTCTGGTCATGTTCCCATTCCTAACTACAAATCCACAGGAACTGGCTATGAAGAATGA 255 0.4275 MASSKQKACDSSWSAKQNKLFEKALAKYDKDTPDRWQNVAKAVGGKSAEEVKRHYELLLEDLRHIESGHVPIPNYKSTGTGYEE 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi70g00102 84 ProSiteProfiles Myb-like domain profile. 5 59 IPR001005 -
Sebi70g00102 84 ProSiteProfiles SANT domain profile. 10 63 IPR017884 -
Sebi70g00102 84 Gene3D - 4 72 - -
Sebi70g00102 84 FunFam Transcription factor SRM1 5 72 - -
Sebi70g00102 84 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 80 IPR044636 GO:0003700
Sebi70g00102 84 SMART sant 9 61 IPR001005 -
Sebi70g00102 84 CDD SANT 12 59 IPR001005 -
Sebi70g00102 84 SUPERFAMILY Homeodomain-like 11 67 IPR009057 -
Sebi70g00102 84 Pfam Myb-like DNA-binding domain 11 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi70g00102 Sebi-Chr70 2312648 2312902 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi70g00102 Myb_DNA-binding 3.5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi70g00102 - - gmx:100785292 148.673