LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi70g00094	ATGTCTCTGTTCAGCTGTCGAACTTTCGCCTTAGTTGAAGAACAGTTCGGTGATTGTCGTAAGTGGTCGCTGGGTGAACATTATATTTTGCTAGTGGTTGCAAGGACTATTAGTATTGCTACTCACATCCTTTCTGTCGAAATCATTAGTTCTAGTTGTGAAGACAGTGATGATACCTCTGGTGGAGAAGATAATGATGGTAGTTGTTGTGGAGAAGATAATGATGATAGTTGTAGTGAAGAGGAATTTCATATTAGGAATGAGAAAGTGGGTGATGAGAAAATGAGTGAGGAAAAAGTGAAATCATATGCGAAAGCTTTAGGTTTTGTTGTTAGGAAAGATGATGTGAAGAAGGATGTAAGGGGACAGATTGTAATGCGCCATATTGTTTGCAATAGAGAAGGATTAAGGAATAAAAAATATTTCATGAAGGTAGATAGGAAAAGAGATCATAAACCTATGACCCGCACAAATTGTTTAGCTAAGTTGCGGATCCACTACCATCAAAGAACATCTAAATGGAGAGTGGTTTCCTTTGAGGAGTGTCATAACCATGAACTTACTCCAGCCAAATTTGTGCATTTGTTGCCTGCATACCGTAAAATGACAGAAGCAGACAAAGCTCAAGTGGACAGTTTGCATTCTTTTGGGGTAAGAACATGTCATATAATGGGGTATCTTGTTTCTCAAAAGGGTGGATATGGTGGTGTTGGGTTTACTAGAAAGGATTTATATAACTATTTGGATAGCAAAACTCGTATGAAGATTAAAGACGGGGATGCACGTGCTGCATTGAGTTATCTACAAGGCAAAGCTGACAATGGAGGGACATTATTTGCTAGATATCAAAATACTAGAAATGGATTAGGACAACATCCCAATGTGAAGCTATTAATTCAGTCATTAAGAGCTTTGAGAGAGTACAGAAATAATGAGTTCGTTGCTGATTTTAAAGGGCTTTATTCAGAACCTGTGATGACTACACCACTTGTGAAGATTGAGAAAGAGGCTTCCAAAGTCTATACAGTGGAGATTTTTAGAGAAGTGAACCAATAG	1056	0.3807	MSLFSCRTFALVEEQFGDCRKWSLGEHYILLVVARTISIATHILSVEIISSSCEDSDDTSGGEDNDGSCCGEDNDDSCSEEEFHIRNEKVGDEKMSEEKVKSYAKALGFVVRKDDVKKDVRGQIVMRHIVCNREGLRNKKYFMKVDRKRDHKPMTRTNCLAKLRIHYHQRTSKWRVVSFEECHNHELTPAKFVHLLPAYRKMTEADKAQVDSLHSFGVRTCHIMGYLVSQKGGYGGVGFTRKDLYNYLDSKTRMKIKDGDARAALSYLQGKADNGGTLFARYQNTRNGLGQHPNVKLLIQSLRALREYRNNEFVADFKGLYSEPVMTTPLVKIEKEASKVYTVEIFREVNQ	351

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi70g00094	351	PANTHER	OS01G0519700 PROTEIN	78	280	-	-
	Sebi70g00094	351	MobiDBLite	consensus disorder prediction	57	78	-	-
	Sebi70g00094	351	Pfam	FAR1 DNA-binding domain	101	188	IPR004330	-
	Sebi70g00094	351	MobiDBLite	consensus disorder prediction	53	78	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi70g00094	Sebi-Chr70	2160505	2162776	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Sebi70g00094		FAR1	5.2e-18	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi70g00094	-		-	ccaj:109792835	263.462