Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi70g00071 ATGGAGGGTGGTGAGAAACCTGGGGATTGTAACTCCCATGGCAATGCCGATATGGATATTGTTGATGCCAATTTGCAACACCAACATCCAGAAAAGAATCAAAATGCAGGTTCTCCTCCCACTCACAATTCCCCTGCTCAGCTACAACAGGATCAAGTAATGGTTGATCAGGGTGATGATAACAAAAATGACGATTCTACTCCTAATCAAATGCTAGAAACCAAAGTAATTAGTGAGAATCAGCTTGAACGTGAAGATGCTAAAACCCTTTCGCATCAGGAATTGATCACTCCAAAGCCTAAAGAAAAGAGTGTCAGAGAAATGAAGAACGTGCTAAACGATACTGAGATGACTGATTATGATGAGTCTGGCACGAGTCTGGAGCGAGAAACATTTATGAAAGAAATCGAGAATTTCTACAGAGAGAGGTCCTTGGAATTTAAGGCTCCTAAGTTTTATGGAGAGCCACTAAATTGCCTTAAGTTATGGAGAGCTGTTATCAGACTAGGTGGCTATGATGTGGTAACTGCATCCAAGTTGTGGCGGCAAGTAGGAGAGTCTTTCCACCCCCCTAAGACTTGCACTACAGTCTCATGGACGTTTAGAATCTTTTATGAGAAGGCACTTTTAGAGTATGAAAAGCATAAGAGAGAGATTGGGGAGCTACAGCTCCCTGTTGGATCATTCCATCAACCATCAAGTGTGGAAAAAGAGACCACTGTTTATCAGGCTCCAGGCTCAGGTAGGGCACGAAGGGATGCGGCGGCACGTGCAATGCAAGGTTGGCATGCTCAGCGCCTTCTTGGATATGGTGAGGTTGCTGAGCCAGTTATTAAGGACAAGAACTTCAGTTCCACACCAAAGCGTGAAAAGAACCTCAAAAGCATTGGCATGATTAATAAGCAGAGGACACCATCTGGACTGGATCAAGATAAAGCTGCCAATATTGAAGGAGATAGACAATTGGTCACAGCAGTAGTTGACGTTGGACCCCCAGCTGACTGGGTGAAGATCAATGTGCGGGAAACTAAGGATTGTTTTGAAGTGTATGCACTAGTTCCTGGGCTGCTTCGTGAGGAGGTGCGAGTCCAGTCAGATCCTGTTGGACGTCTTGTTATAACTGGTCTGCCGGAACAGGTTGACAATCCATGGGGAATTACACCCTTCAAAAAGGTTGTGAACTTACCTGCGAGAATTGATCCTCTTCAGACATCTGCTGTTGTTAGTTTGCATGGTCGACTATTTGTACGCGTTCCTTTCGAGCAGGGAGCTGTATGA 1278 0.4491 MEGGEKPGDCNSHGNADMDIVDANLQHQHPEKNQNAGSPPTHNSPAQLQQDQVMVDQGDDNKNDDSTPNQMLETKVISENQLEREDAKTLSHQELITPKPKEKSVREMKNVLNDTEMTDYDESGTSLERETFMKEIENFYRERSLEFKAPKFYGEPLNCLKLWRAVIRLGGYDVVTASKLWRQVGESFHPPKTCTTVSWTFRIFYEKALLEYEKHKREIGELQLPVGSFHQPSSVEKETTVYQAPGSGRARRDAAARAMQGWHAQRLLGYGEVAEPVIKDKNFSSTPKREKNLKSIGMINKQRTPSGLDQDKAANIEGDRQLVTAVVDVGPPADWVKINVRETKDCFEVYALVPGLLREEVRVQSDPVGRLVITGLPEQVDNPWGITPFKKVVNLPARIDPLQTSAVVSLHGRLFVRVPFEQGAV 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi70g00071 425 MobiDBLite consensus disorder prediction 78 102 - -
Sebi70g00071 425 SUPERFAMILY HSP20-like chaperones 333 420 IPR008978 -
Sebi70g00071 425 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 324 425 IPR002068 -
Sebi70g00071 425 CDD ACD_sHsps_p23-like 340 419 - -
Sebi70g00071 425 MobiDBLite consensus disorder prediction 27 56 - -
Sebi70g00071 425 FunFam AT-rich interactive domain-containing protein 3 126 225 - -
Sebi70g00071 425 Gene3D - 127 224 IPR036431 GO:0003677
Sebi70g00071 425 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 30 422 IPR045147 GO:0006357
Sebi70g00071 425 MobiDBLite consensus disorder prediction 1 102 - -
Sebi70g00071 425 SUPERFAMILY ARID-like 115 224 IPR036431 GO:0003677
Sebi70g00071 425 SMART ARID_2 123 213 - -
Sebi70g00071 425 ProSiteProfiles ARID domain profile. 126 217 IPR001606 GO:0003677
Sebi70g00071 425 SMART bright_3 127 218 IPR001606 GO:0003677
Sebi70g00071 425 CDD ARID 128 213 - -
Sebi70g00071 425 Gene3D - 323 424 IPR008978 -
Sebi70g00071 425 Pfam Hsp20/alpha crystallin family 340 421 IPR002068 -
Sebi70g00071 425 FunFam AT-rich interactive domain-containing protein 3 316 424 - -
Sebi70g00071 425 Pfam ARID/BRIGHT DNA binding domain 128 213 IPR001606 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi70g00071 Sebi-Chr70 1625831 1630546 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi70g00071 97 422 ARID Transcription Factor Family AT1G76510 71.951 1.25e-161 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Sebi70g00071 ARID 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi70g00071 - - gmx:100797486 678.322