Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi70g00066 ATGGAAGAGGTACTGTGTGAACTTAGTGATCATGAAAAGAGAAACGAGCAAGGTCTGCCACCGGGTTTTAGGTTTCATCCAACTGATGAAGAACTCATAACCTTTTATTTGGCTTCAAAGGTGTTTAATGCCACCTTCACTACTACTAATGTCAAGTTTGCCGAAGTTGACCTCAATAGGTGTGAGCCTTGGGAACTCCCAGATGTGGCAAAGATGGGGGAAAGAGAGTGGTACCTGTTCAGCTTGAGGGACAGAAAATACCCAACAGGACTAAGAACTAACAGAGCAACTGGAGCTGGGTACTGGAAGGCTACTGGGAAGGACAAGGAGGTTTACAGTGCCTCAAATGGTGCCCTACTTGGGATGAAGAAGACCCTTGTTTTCTACAAAGGCAGGGCCCCTCGTGGTGAAAAGACCAAATGGGTCATGCATGAGTACCGTTTGGATGGTCACTTTTCCCTTTCTCACCCTCACACTCACATTCACACCTGTAAGGAGGAATGGGTGATATGTAGGATATTTCATAAATCTGGGGAAAAGAGAAGTGCAATGCTCCAAGTACAAGGACAATTGGACACAAAAGAATCTCAATCCCAAAGCACTTCCCAGCCCAACTTCCAAGGCCAAATTCTGAATATTCCCCACCAACACCAAAATGATCATCTTTTCCCATTCCAAACATCTTTCCCAATCACTGCTGCTACAGATACACAACCAGGAGAAATCACCTACACCACCAGTAGAAACAATCATTCATCTTCTCAATCTCAACTACTATTCCTCAAGTCACAACAAAATTGCATGACCCTCAAGATCAAGGAGCAAGCCATTCCAAAACTAACCAAAACAGAGGCTCCATTCTGTGAATATCAATCACTAGATGGCACTAATAACTTGAGCAGCTGGATAGAGAAGCTGAACCAAAATCCAAGTAATTTCCAGAACCCCTTCCCTCTTGAGATGGATGGTGCAGCCCTGATGGTGTTCTCAGGGAACACAAATGCTGAATTTAGGGACATGAACAAACAGATGATGCAGCAGCTAGATGCTCCTATCCTATGGGAATAG 1068 0.4438 MEEVLCELSDHEKRNEQGLPPGFRFHPTDEELITFYLASKVFNATFTTTNVKFAEVDLNRCEPWELPDVAKMGEREWYLFSLRDRKYPTGLRTNRATGAGYWKATGKDKEVYSASNGALLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGHFSLSHPHTHIHTCKEEWVICRIFHKSGEKRSAMLQVQGQLDTKESQSQSTSQPNFQGQILNIPHQHQNDHLFPFQTSFPITAATDTQPGEITYTTSRNNHSSSQSQLLFLKSQQNCMTLKIKEQAIPKLTKTEAPFCEYQSLDGTNNLSSWIEKLNQNPSNFQNPFPLEMDGAALMVFSGNTNAEFRDMNKQMMQQLDAPILWE 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi70g00066 355 ProSiteProfiles NAC domain profile. 19 176 IPR003441 GO:0003677|GO:0006355
Sebi70g00066 355 Pfam No apical meristem (NAM) protein 20 148 IPR003441 GO:0003677|GO:0006355
Sebi70g00066 355 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 262 - -
Sebi70g00066 355 SUPERFAMILY NAC domain 14 176 IPR036093 GO:0003677|GO:0006355
Sebi70g00066 355 Gene3D NAC domain 28 180 IPR036093 GO:0003677|GO:0006355
Sebi70g00066 355 FunFam NAC domain-containing protein 100-like 28 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi70g00066 Sebi-Chr70 1542327 1544486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi70g00066 1 185 NAC Transcription Factor Family AT1G76420 71.351 1.83e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sebi70g00066 NAM 7.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi70g00066 - - gmx:100808967 415.616