Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi70g00049 ATGAATGGATACTTGAATGGCCAGTTATCTGTTTCCCGTGCTTTAGGAGACTGGCACATGAAGGGTCCCAAGGGTTCTCCCTGCCCTTTGAGTGCAGAACCAGAGTTGCAGGAAATCTGCTTGACTGAGGATGATGAGTTCTTGATTATGGGCTGTGACGGTCTGTGGGATGTAATGAGCAACCAATGTGCTGTGACCATGGCAAGGAAAGAATTGATGATACTAATGATCCTCAAAGATCCACCTCCTAGGATAGAGACACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAGGCCTCAATTTACTAAGGGTGTATTGGACTGTTAGTTTTAGTTCATGGTGA 348 0.4598 MNGYLNGQLSVSRALGDWHMKGPKGSPCPLSAEPELQEICLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMILMILKDPPPRIETPPSRVRRSISAEGLNLLRVYWTVSFSSW 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi70g00049 115 PANTHER PROTEIN PHOSPHATASE 2C 3 73 IPR015655 GO:0004722|GO:0006470
Sebi70g00049 115 Gene3D - 1 101 IPR036457 -
Sebi70g00049 115 CDD PP2Cc 1 72 IPR001932 -
Sebi70g00049 115 ProSiteProfiles PPM-type phosphatase domain profile. 1 115 IPR001932 -
Sebi70g00049 115 SUPERFAMILY PP2C-like 2 72 IPR036457 -
Sebi70g00049 115 Pfam Protein phosphatase 2C 2 73 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi70g00049 Sebi-Chr70 1216917 1217347 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi70g00049 2 105 PP2C-type Phosphatase Gene Family AT2G33700 63.158 6.06e-49 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi70g00049 K14803 - gmx:100778015 179.489