Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi70g00044 ATGGAGGCAGAGCATGATATCTCAAATGGTATTGGAAGCTTGTACGTCAAAGTGATGACTGACGAACAAATGGAACTGCTGAGGCAACAGATATCTGTTTACGCCACCATTTGTGAGCGCCTTGTTGAGATGCACAAGGCCATCACTACTCAACAGGACCTCGCCGGACTGAGGCTGGGTAATTTGTACTGTGATCCTCTGATGGCATGCTCTGGACACAAGATAACTGCTAGGCAGCGGTGGACTCCAACGCCTCTGCAGCTTCAAATACTGGAGCGTATTTTTGATGAAGGCAATGGCACTCCAAGCAAACAGAAGATCAAAGATATAACCATAGAATTGGGGCAACATGGTCAAATATCAGAGACAAATGTTTATAATTGGTTCCAGAACAGAAGAGCTCGTTCAAAGCGGAAGCAACTAGCTCCTGCACCAAGTCATGTTGAACCAGAGGCAGAGGCAGAGCCAGAGACAGAAGTTGAGTCTCCAAAAGAGAAAAAGAATCGTGCAGAAAATGTTCAAGTTCAACCCTATGAGGATACTTCATCACCTCATAGGGATAGGGATATGTACATCCAGAGTCCTGACATAGGATTTGAGCAATTGTTGGGTAAAATAGAAGCTGCAGGCTGGTGGACTCAACATTGTTGA 651 0.4531 MEAEHDISNGIGSLYVKVMTDEQMELLRQQISVYATICERLVEMHKAITTQQDLAGLRLGNLYCDPLMACSGHKITARQRWTPTPLQLQILERIFDEGNGTPSKQKIKDITIELGQHGQISETNVYNWFQNRRARSKRKQLAPAPSHVEPEAEAEPETEVESPKEKKNRAENVQVQPYEDTSSPHRDRDMYIQSPDIGFEQLLGKIEAAGWWTQHC 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi70g00044 216 CDD homeodomain 78 140 IPR001356 GO:0003677
Sebi70g00044 216 MobiDBLite consensus disorder prediction 137 191 - -
Sebi70g00044 216 Gene3D - 79 143 - -
Sebi70g00044 216 PANTHER WUSCHEL-RELATED HOMEOBOX 13 10 200 IPR044559 GO:0003700
Sebi70g00044 216 SMART HOX_1 76 143 IPR001356 GO:0003677
Sebi70g00044 216 SUPERFAMILY Homeodomain-like 77 140 IPR009057 -
Sebi70g00044 216 ProSiteProfiles 'Homeobox' domain profile. 74 139 IPR001356 GO:0003677
Sebi70g00044 216 Pfam Homeodomain 78 138 IPR001356 GO:0003677
Sebi70g00044 216 MobiDBLite consensus disorder prediction 150 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi70g00044 Sebi-Chr70 1159233 1160601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi70g00044 14 197 Wox Gene Family AT4G35550 60.513 9.37e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Sebi70g00044 Homeodomain 1e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi70g00044 - - gmx:100820530 342.428